[←][→] ath   AT3G54300 Gene
functional annotation
Function   vesicle-associated membrane protein 727  
GO BP
GO:0006623 [list] [network] protein targeting to vacuole  (36 genes)  IMP  
GO:0007033 [list] [network] vacuole organization  (54 genes)  IMP  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  IEA  
GO CC
GO:0033263 [list] [network] CORVET complex  (4 genes)  IDA  
GO:0031901 [list] [network] early endosome membrane  (15 genes)  IEA  
GO:0031201 [list] [network] SNARE complex  (32 genes)  IPI  
GO:0005768 [list] [network] endosome  (424 genes)  IDA TAS  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_001078283.1  NP_001326058.1  NP_190998.1 
BLAST NP_001078283.1  NP_001326058.1  NP_190998.1 
Orthologous [Ortholog page] LOC4346309 (osa)  LOC7469529 (ppo)  LOC7486902 (ppo)  LOC25485565 (mtr)  LOC100216858 (zma)  LOC100243052 (vvi)  LOC100777402 (gma)  LOC100806307 (gma)  LOC101264388 (sly)  LOC103829971 (bra)  LOC103841346 (bra)  LOC103863239 (bra) 
Subcellular
localization
wolf
cyto 3,  E.R. 2,  mito 1,  golg 1,  cyto_pero 1,  E.R._plas 1  (predict for NP_001078283.1)
cyto 3,  E.R. 2,  mito 1,  golg 1,  cyto_pero 1,  E.R._plas 1  (predict for NP_001326058.1)
cyto 3,  E.R. 2,  mito 1,  golg 1,  cyto_pero 1,  E.R._plas 1  (predict for NP_190998.1)
Subcellular
localization
TargetP
scret 5  (predict for NP_001078283.1)
scret 5  (predict for NP_001326058.1)
scret 5  (predict for NP_190998.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04120 Ubiquitin mediated proteolysis 2
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with VAMP727 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 RABG3E RAB GTPase homolog G3E [detail] 841353
6.9 SGR4 Vesicle transport v-SNARE family protein [detail] 833947
6.8 UBC34 ubiquitin-conjugating enzyme 34 [detail] 838300
6.5 AT3G48880 RNI-like superfamily protein [detail] 824049
Coexpressed
gene list		 [Coexpressed gene list for VAMP727]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251877_at
251877_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251877_at
251877_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251877_at
251877_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824597      
Refseq ID (protein) NP_001078283.1 
NP_001326058.1 
NP_190998.1 


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