[←][→] ath   AT3G54390 Gene
functional annotation
Function   sequence-specific DNA binding transcription factor  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
KEGG
Protein NP_001327946.1  NP_191007.1 
BLAST NP_001327946.1  NP_191007.1 
Orthologous [Ortholog page] LOC4347833 (osa)  LOC7460246 (ppo)  LOC7486995 (ppo)  LOC11429189 (mtr)  LOC25482836 (mtr)  LOC100254951 (vvi)  LOC100267221 (vvi)  LOC100784245 (gma)  LOC100793978 (gma)  LOC100799917 (gma)  LOC100813972 (gma)  LOC101266671 (sly)  LOC103633124 (zma)  LOC103647652 (zma)  LOC103841352 (bra) 
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  cyto 2,  chlo 1,  plas 1,  extr 1  (predict for NP_001327946.1)
nucl 5,  nucl_plas 4,  mito 3,  plas 1  (predict for NP_191007.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001327946.1)
other 8,  chlo 4  (predict for NP_191007.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G54390 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 WOX4 WUSCHEL related homeobox 4 [detail] 841113
5.1 CAD6 cinnamyl alcohol dehydrogenase 6 [detail] 829953
4.6 GDU1 glutamine dumper 1 [detail] 829301
Coexpressed
gene list		 [Coexpressed gene list for AT3G54390]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251896_at
251896_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251896_at
251896_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251896_at
251896_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824605      
Refseq ID (protein) NP_001327946.1 
NP_191007.1 


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