[←][→] ath   At3g54480 Gene
functional annotation
Function   SKP1/ASK-interacting protein 5    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO:0010605 [list] [network] negative regulation of macromolecule metabolic process  (704 genes)  IEA  
GO:0006996 [list] [network] organelle organization  (1102 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001326219.1  NP_001326220.1  NP_001326221.1  NP_001326222.1  NP_001326223.1  NP_566999.1  NP_567000.2 
BLAST NP_001326219.1  NP_001326220.1  NP_001326221.1  NP_001326222.1  NP_001326223.1  NP_566999.1  NP_567000.2 
Orthologous [Ortholog page] LOC543829 (sly)  LOC4344171 (osa)  LOC7476855 (ppo)  LOC11421143 (mtr)  LOC100808414 (gma)  LOC103841358 (bra)  LOC112328195 (ppo)  LOC123043861 (tae)  LOC123051735 (tae)  LOC123187642 (tae)  LOC123424896 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001326219.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  extr 1,  cysk 1,  chlo_mito 1  (predict for NP_001326220.1)
nucl 4,  cyto_nucl 4,  mito 2,  cyto 1,  chlo 1,  extr 1  (predict for NP_001326221.1)
cyto 4,  cyto_nucl 4,  nucl 1,  mito 1,  plas 1,  extr 1,  cysk 1,  chlo_mito 1,  cyto_mito 1,  cysk_plas 1  (predict for NP_001326222.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001326223.1)
cyto 4,  cyto_nucl 4,  nucl 1,  mito 1,  plas 1,  extr 1,  cysk 1,  chlo_mito 1,  cyto_mito 1,  cysk_plas 1  (predict for NP_566999.1)
cyto 4,  nucl 3,  cyto_E.R. 3  (predict for NP_567000.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001326219.1)
other 9  (predict for NP_001326220.1)
other 9  (predict for NP_001326221.1)
other 9  (predict for NP_001326222.1)
other 9  (predict for NP_001326223.1)
other 9  (predict for NP_566999.1)
other 9  (predict for NP_567000.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SKIP5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 TOM2B tobamovirus multiplication 2B [detail] 840129
7.1 AT3G02300 Regulator of chromosome condensation (RCC1) family protein [detail] 821167
6.3 AT5G66240 Transducin/WD40 repeat-like superfamily protein [detail] 836756
5.9 AT5G67610 transmembrane protein (DUF2215) [detail] 836897
5.9 ING2 PHD finger protein-like protein [detail] 841881
5.5 AT5G10710 centromere protein O [detail] 830936
5.2 SSP5 SCP1-like small phosphatase 5 [detail] 831059
Coexpressed
gene list		 [Coexpressed gene list for SKIP5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251867_at
251867_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251867_at
251867_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251867_at
251867_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824613      
Refseq ID (protein) NP_001326219.1 
NP_001326220.1 
NP_001326221.1 
NP_001326222.1 
NP_001326223.1 
NP_566999.1 
NP_567000.2 


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