[←][→] ath   At3g54540 Gene
functional annotation
Function   general control non-repressible 4    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO MF
KEGG
Protein NP_001327731.1  NP_567001.1 
BLAST NP_001327731.1  NP_567001.1 
Orthologous [Ortholog page] LOC4333216 (osa)  LOC7497771 (ppo)  LOC11443182 (mtr)  LOC18102810 (ppo)  LOC25484026 (mtr)  LOC25497649 (mtr)  LOC100806226 (gma)  LOC100806865 (gma)  ABCF3 (sly)  LOC103841361 (bra)  LOC103863225 (bra)  LOC123062524 (tae)  LOC123079679 (tae)  LOC123146240 (tae)  LOC123183146 (tae)  LOC123419865 (hvu)  LOC123444953 (hvu)  LOC123450515 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001327731.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_567001.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001327731.1)
other 8  (predict for NP_567001.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with ABCF4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 CDC5 cell division cycle 5 [detail] 837506
8.8 AT5G06110 DnaJ and myb-like DNA-binding domain-containing protein [detail] 830498
8.5 UBP2 ubiquitin-specific protease 2 [detail] 839397
8.2 AT5G05520 Outer membrane OMP85 family protein [detail] 830435
8.2 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein [detail] 841668
6.8 emb1220 pre-mRNA processing ribonucleoprotein binding region-containing protein [detail] 842312
6.6 AT5G20200 nucleoporin-like protein [detail] 832143
5.9 AT2G38950 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [detail] 818480
5.9 AT5G10630 Translation elongation factor EF1A/initiation factor IF2gamma family protein [detail] 830928
Coexpressed
gene list		 [Coexpressed gene list for ABCF4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251845_at
251845_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251845_at
251845_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251845_at
251845_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824619      
Refseq ID (protein) NP_001327731.1 
NP_567001.1 


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