[←][→] ath   At3g54590 Gene
functional annotation
Function   hydroxyproline-rich glycoprotein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009664 [list] [network] plant-type cell wall organization  (180 genes)  IEA  
GO CC
GO MF
GO:0005199 [list] [network] structural constituent of cell wall  (31 genes)  IEA  
KEGG
Protein NP_001325986.1  NP_001325987.1  NP_191022.2 
BLAST NP_001325986.1  NP_001325987.1  NP_191022.2 
Orthologous [Ortholog page] AT3G28550 (ath)  AT3G54580 (ath)  LOC103829985 (bra)  LOC103841364 (bra)  LOC103863223 (bra)  LOC103863226 (bra) 
Subcellular
localization
wolf
extr 6,  chlo 1,  cyto 1,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001325986.1)
extr 5,  vacu 3,  cyto 1,  E.R. 1,  golg 1,  cyto_E.R. 1  (predict for NP_001325987.1)
extr 5,  vacu 3,  cyto 1,  E.R. 1,  golg 1,  cyto_E.R. 1  (predict for NP_191022.2)
Subcellular
localization
TargetP
scret 8  (predict for NP_001325986.1)
scret 7  (predict for NP_001325987.1)
scret 7  (predict for NP_191022.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with HRGP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
22.1 AT3G54580 Proline-rich extensin-like family protein [detail] 824623
20.2 EXT10 Proline-rich extensin-like family protein [detail] 830552
19.5 EXT6 Proline-rich extensin-like family protein [detail] 817037
16.2 AT1G23720 Proline-rich extensin-like family protein [detail] 838982
11.2 AT3G28550 Proline-rich extensin-like family protein [detail] 822485
Coexpressed
gene list		 [Coexpressed gene list for HRGP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251843_x_at
251843_x_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251843_x_at
251843_x_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251843_x_at
251843_x_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824624      
Refseq ID (protein) NP_001325986.1 
NP_001325987.1 
NP_191022.2 


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