[←][→] ath   At3g54750 Gene
functional annotation
Function   downstream neighbor of Son      
GO BP
GO:0048523 [list] [network] negative regulation of cellular process  (960 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001190093.1  NP_001327038.1  NP_001327039.1  NP_191035.2  NP_850703.1 
BLAST NP_001190093.1  NP_001327038.1  NP_001327039.1  NP_191035.2  NP_850703.1 
Orthologous [Ortholog page] LOC4352823 (osa)  LOC7455613 (ppo)  LOC7488068 (ppo)  LOC25497873 (mtr)  LOC25499530 (mtr)  LOC100796531 (gma)  LOC100816076 (gma)  LOC101266252 (sly)  LOC103841376 (bra)  LOC103863208 (bra)  LOC123062253 (tae)  LOC123071009 (tae)  LOC123079383 (tae)  LOC123115502 (tae)  LOC123119229 (tae)  LOC123395396 (hvu)  LOC123444570 (hvu) 
Subcellular
localization
wolf
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001190093.1)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001327038.1)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001327039.1)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_191035.2)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_850703.1)
Subcellular
localization
TargetP
other 8,  mito 6  (predict for NP_001190093.1)
other 8,  mito 6  (predict for NP_001327038.1)
other 8,  mito 6  (predict for NP_001327039.1)
other 8,  mito 6  (predict for NP_191035.2)
other 8,  mito 6  (predict for NP_850703.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath00270 Cysteine and methionine metabolism 2
ath03030 DNA replication 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
Genes directly connected with AT3G54750 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.5 HTA6 histone H2A 6 [detail] 836109
11.9 MET1 methyltransferase 1 [detail] 834975
11.8 BARD1 breast cancer associated RING 1 [detail] 839329
11.1 WEE1 WEE1-like kinase [detail] 839453
11.0 AT4G14310 Transducin/WD40 repeat-like superfamily protein [detail] 827072
10.6 SDG4 SET domain group 4 [detail] 829210
9.8 CMT3 chromomethylase 3 [detail] 843313
7.3 SUVH4 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein [detail] 831244
7.3 RECQ4A DNA helicase (RECQl4A) [detail] 837636
Coexpressed
gene list		 [Coexpressed gene list for AT3G54750]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251852_at
251852_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251852_at
251852_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251852_at
251852_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824640      
Refseq ID (protein) NP_001190093.1 
NP_001327038.1 
NP_001327039.1 
NP_191035.2 
NP_850703.1 


The preparation time of this page was 0.1 [sec].