[←][→] ath   AT3G54750 Gene
functional annotation
Function   downstream neighbor of Son  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001190093.1  NP_001327038.1  NP_001327039.1  NP_191035.2  NP_850703.1 
BLAST NP_001190093.1  NP_001327038.1  NP_001327039.1  NP_191035.2  NP_850703.1 
Orthologous [Ortholog page] LOC4352823 (osa)  LOC25497873 (mtr)  LOC25499530 (mtr)  LOC100257121 (vvi)  LOC100274059 (zma)  LOC100796531 (gma)  LOC100816076 (gma)  LOC101266252 (sly)  LOC103841376 (bra)  LOC103863208 (bra) 
Subcellular
localization
wolf
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001190093.1)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001327038.1)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001327039.1)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_191035.2)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for NP_850703.1)
Subcellular
localization
TargetP
other 8,  mito 6  (predict for NP_001190093.1)
other 8,  mito 6  (predict for NP_001327038.1)
other 8,  mito 6  (predict for NP_001327039.1)
other 8,  mito 6  (predict for NP_191035.2)
other 8,  mito 6  (predict for NP_850703.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 5
ath03030 DNA replication 5
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath00270 Cysteine and methionine metabolism 2
Genes directly connected with AT3G54750 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.1 HTA6 histone H2A 6 [detail] 836109
12.0 MET1 methyltransferase 1 [detail] 834975
11.9 BARD1 breast cancer associated RING 1 [detail] 839329
9.9 CMT3 chromomethylase 3 [detail] 843313
7.4 SUVH4 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein [detail] 831244
5.7 AT3G62060 Pectinacetylesterase family protein [detail] 825379
5.6 POLD2 DNA polymerase delta small subunit [detail] 818812
5.5 RPA32B Replication protein A, subunit RPA32 [detail] 821187
Coexpressed
gene list		 [Coexpressed gene list for AT3G54750]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251852_at
251852_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251852_at
251852_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251852_at
251852_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824640      
Refseq ID (protein) NP_001190093.1 
NP_001327038.1 
NP_001327039.1 
NP_191035.2 
NP_850703.1 


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