[←][→] ath   At3g54840 Gene
functional annotation
Function   Ras-related small GTP-binding family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045022 [list] [network] early endosome to late endosome transport  (1 genes)  IMP  
GO CC
GO:0010009 [list] [network] cytoplasmic side of endosome membrane  (2 genes)  IDA  
GO:0005769 [list] [network] early endosome  (23 genes)  IDA  
GO:0005768 [list] [network] endosome  (350 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0003924 [list] [network] GTPase activity  (79 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001078287.1  NP_001327724.1  NP_567008.1 
BLAST NP_001078287.1  NP_001327724.1  NP_567008.1 
Orthologous [Ortholog page] LOC4331646 (osa)  LOC4348725 (osa)  LOC7463449 (ppo)  LOC7479861 (ppo)  LOC25484933 (mtr)  LOC100305769 (gma)  LOC100500544 (gma)  LOC101245117 (sly)  LOC103841387 (bra)  LOC103863200 (bra)  LOC123084906 (tae)  LOC123093168 (tae)  LOC123098437 (tae)  LOC123119169 (tae)  LOC123449464 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001078287.1)
cyto 6,  chlo 1,  nucl 1,  chlo_mito 1,  cysk_nucl 1  (predict for NP_001327724.1)
chlo 4,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_567008.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_001078287.1)
mito 4  (predict for NP_001327724.1)
other 6,  chlo 5  (predict for NP_567008.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 6
ath04141 Protein processing in endoplasmic reticulum 3
Genes directly connected with ARA6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 ATG3 autophagy 3 (APG3) [detail] 836271
8.2 UBC36 ubiquitin-conjugating enzyme 36 [detail] 838260
7.3 AT3G18430 Calcium-binding EF-hand family protein [detail] 821372
6.7 UBC34 ubiquitin-conjugating enzyme 34 [detail] 838300
6.5 emb1067 RNA 2'-phosphotransferase, Tpt1 / KptA family [detail] 819141
6.2 UBC7 ubiquitin-conjugating enzyme E2 [detail] 836048
6.1 AT5G07910 Leucine-rich repeat (LRR) family protein [detail] 830685
5.1 ATFP8 Ras-related small GTP-binding family protein [detail] 820345
Coexpressed
gene list		 [Coexpressed gene list for ARA6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251817_at
251817_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251817_at
251817_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251817_at
251817_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824649      
Refseq ID (protein) NP_001078287.1 
NP_001327724.1 
NP_567008.1 


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