ATTED-II : GeneID search result

[←][→] ath At3g55060 Gene

functional annotation

Function

CAP-gly domain linker

GO BP

GO:0022607 [list] [network] cellular component assembly

(625 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(13880 genes)

ISM

GO MF

KEGG

Protein

NP_001319753.1 NP_001326555.1 NP_191066.1

BLAST

NP_001319753.1 NP_001326555.1 NP_191066.1

Orthologous

[Ortholog page] AT2G39300 (ath) LOC4344336 (osa) LOC7457900 (ppo) LOC7458621 (ppo) LOC11443765 (mtr) LOC100780589 (gma) LOC100804358 (gma) LOC101253381 (sly) LOC103830005 (bra) LOC103857859 (bra) LOC103867055 (bra) LOC107280459 (osa) LOC123043630 (tae) LOC123051506 (tae) LOC123092274 (tae) LOC123187428 (tae) LOC123397766 (hvu) LOC123424675 (hvu) LOC123448768 (hvu)

Subcellular
localization
wolf

nucl 8, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001319753.1)
nucl 8, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001326555.1)
nucl 8, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_191066.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001319753.1)
other 8	(predict for NP_001326555.1)
other 8	(predict for NP_191066.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G55060 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
8.0	EHD2	EPS15 homology domain 2	[detail]	825902
7.9	AT5G33300	chromosome-associated kinesin-like protein	[detail]	833303
7.7	CHR24	chromatin remodeling 24	[detail]	836516

Coexpressed
gene list

[Coexpressed gene list for AT3G55060]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251822_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251822_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251822_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	824672
Refseq ID (protein)	NP_001319753.1
	NP_001326555.1
	NP_191066.1

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