[←][→] ath   At3g55170 Gene
functional annotation
Function   Ribosomal L29 family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_001319756.1  NP_001327436.1  NP_001327437.1  NP_191077.1  NP_974440.1 
BLAST NP_001319756.1  NP_001327436.1  NP_001327437.1  NP_191077.1  NP_974440.1 
Orthologous [Ortholog page] LOC778319 (sly)  AT2G39390 (ath)  AT3G09500 (ath)  AT5G02610 (ath)  LOC4329423 (osa)  LOC4335607 (osa)  LOC7458614 (ppo)  LOC7469794 (ppo)  LOC7491950 (ppo)  LOC7492262 (ppo)  LOC11412433 (mtr)  LOC11446573 (mtr)  LOC25484086 (mtr)  LOC25485738 (mtr)  LOC100305671 (gma)  LOC100306624 (gma)  LOC100778013 (gma)  LOC100789845 (gma)  LOC100798230 (gma)  LOC100801539 (gma)  LOC101256286 (sly)  LOC101267698 (sly)  LOC103847436 (bra)  LOC103848098 (bra)  LOC103850454 (bra)  LOC103857864 (bra)  LOC103859293 (bra)  LOC103870540 (bra)  LOC123045266 (tae)  LOC123053102 (tae)  LOC123189008 (tae)  LOC123426489 (hvu) 
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  plas 1,  cyto 1,  pero 1,  cysk 1,  cyto_pero 1  (predict for NP_001319756.1)
nucl 6,  nucl_plas 5,  plas 3  (predict for NP_001327436.1)
nucl 6,  nucl_plas 5,  plas 3  (predict for NP_001327437.1)
nucl 6,  nucl_plas 4,  plas 1,  cyto 1,  pero 1,  cysk 1,  cyto_pero 1  (predict for NP_191077.1)
nucl 6,  nucl_plas 4,  plas 1,  cyto 1,  pero 1,  cysk 1,  cyto_pero 1  (predict for NP_974440.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001319756.1)
other 7  (predict for NP_001327436.1)
other 7  (predict for NP_001327437.1)
other 8  (predict for NP_191077.1)
other 8  (predict for NP_974440.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
Genes directly connected with AT3G55170 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.2 AT3G09500 Ribosomal L29 family protein [detail] 820107
8.2 AT2G43460 Ribosomal L38e protein family [detail] 818947
8.1 AT3G53740 Ribosomal protein L36e family protein [detail] 824541
6.2 GIP1 AtGCP3 interacting protein 1 [detail] 826539
Coexpressed
gene list		 [Coexpressed gene list for AT3G55170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251834_at
251834_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251834_at
251834_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251834_at
251834_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824683      
Refseq ID (protein) NP_001319756.1 
NP_001327436.1 
NP_001327437.1 
NP_191077.1 
NP_974440.1 


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