[←][→] ath   At3g55370 Gene
functional annotation
Function   OBF-binding protein 3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009640 [list] [network] photomorphogenesis  (80 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IEA IMP ISS  
KEGG
Protein NP_001190095.1  NP_191097.3  NP_974442.1 
BLAST NP_001190095.1  NP_191097.3  NP_974442.1 
Orthologous [Ortholog page] DOF2.4 (ath)  LOC4334599 (osa)  LOC4342790 (osa)  LOC7454919 (ppo)  LOC7481542 (ppo)  LOC7485712 (ppo)  LOC7488106 (ppo)  LOC11419272 (mtr)  LOC11445864 (mtr)  LOC18102719 (ppo)  LOC25487871 (mtr)  LOC25492502 (mtr)  LOC25498443 (mtr)  LOC100775899 (gma)  LOC100787357 (gma)  LOC100787775 (gma)  LOC100796820 (gma)  LOC100801154 (gma)  LOC100816635 (gma)  LOC100816936 (gma)  LOC101250604 (sly)  LOC101255126 (sly)  LOC101256250 (sly)  LOC101262880 (sly)  LOC101266710 (sly)  LOC102662809 (gma)  LOC103841443 (bra)  LOC103857721 (bra)  LOC103863170 (bra)  LOC103865610 (bra)  LOC103867181 (bra)  LOC112328836 (ppo)  LOC117128901 (bra)  LOC123057364 (tae)  LOC123076001 (tae)  LOC123105668 (tae)  LOC123113990 (tae)  LOC123123494 (tae)  LOC123399244 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_001190095.1)
nucl 8,  extr 1  (predict for NP_191097.3)
nucl 9,  chlo 1,  extr 1  (predict for NP_974442.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190095.1)
chlo 4,  other 4  (predict for NP_191097.3)
chlo 4,  other 4  (predict for NP_974442.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with OBP3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT3G52490 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein [detail] 824414
6.3 DAG1 Dof-type zinc finger DNA-binding family protein [detail] 825358
6.1 BHLH32 basic helix-loop-helix 32 [detail] 822159
5.5 DAG2 Dof-type zinc finger DNA-binding family protein [detail] 819271
5.4 AT5G67090 Subtilisin-like serine endopeptidase family protein [detail] 836844
5.2 AT2G28510 Dof-type zinc finger DNA-binding family protein [detail] 817399
5.0 AT1G64700 DUF4228 domain protein [detail] 842778
4.9 AT1G58170 Disease resistance-responsive (dirigent-like protein) family protein [detail] 842184
4.3 AT5G03610 GDSL-like Lipase/Acylhydrolase superfamily protein [detail] 831778
Coexpressed
gene list		 [Coexpressed gene list for OBP3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251806_at
251806_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251806_at
251806_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251806_at
251806_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824703      
Refseq ID (protein) NP_001190095.1 
NP_191097.3 
NP_974442.1 


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