[←][→] ath   AT3G55480 Gene
functional annotation
Function   protein affected trafficking 2  
GO BP
GO:0080171 [list] [network] lytic vacuole organization  (5 genes)  IMP  
GO:0006896 [list] [network] Golgi to vacuole transport  (19 genes)  IMP  
GO:0051453 [list] [network] regulation of intracellular pH  (24 genes)  IMP  
GO:0006886 [list] [network] intracellular protein transport  (516 genes)  IEA  
GO CC
GO:0030123 [list] [network] AP-3 adaptor complex  (2 genes)  IEA  
GO:0005623 [list] [network] cell  (76 genes)  IMP  
GO:0030659 [list] [network] cytoplasmic vesicle membrane  (91 genes)  IEA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_567022.1  NP_974443.4 
BLAST NP_567022.1  NP_974443.4 
Orthologous [Ortholog page] LOC4326400 (osa)  LOC7458139 (ppo)  LOC11433764 (mtr)  LOC100251289 (vvi)  LOC100383432 (zma)  LOC100802718 (gma)  LOC100806345 (gma)  LOC101259755 (sly)  LOC103841454 (bra) 
Subcellular
localization
wolf
chlo 5,  vacu 3,  E.R. 1  (predict for NP_567022.1)
chlo 6,  nucl 2,  E.R. 1  (predict for NP_974443.4)
Subcellular
localization
TargetP
scret 7  (predict for NP_567022.1)
other 7  (predict for NP_974443.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
Genes directly connected with PAT2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 GC6 golgin Putative 6 [detail] 822375
5.7 AT2G26780 ARM repeat superfamily protein [detail] 817219
5.6 AT1G50120 immunoglobulin [detail] 841434
Coexpressed
gene list		 [Coexpressed gene list for PAT2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251808_at
251808_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251808_at
251808_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251808_at
251808_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824714      
Refseq ID (protein) NP_567022.1 
NP_974443.4 


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