[][] ath   At3g55960 Gene
functional annotation
Function   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_191155.1 
BLAST NP_191155.1 
Orthologous [Ortholog page] LOC4327404 (osa)LOC4339051 (osa)LOC7460355 (ppo)LOC7487322 (ppo)LOC7488022 (ppo)LOC7490326 (ppo)LOC11411270 (mtr)LOC11428642 (mtr)LOC100783451 (gma)LOC100819720 (gma)LOC101252994 (sly)LOC101257861 (sly)LOC103830029 (bra)LOC103841497 (bra)LOC103865772 (bra)LOC123059667 (tae)LOC123062495 (tae)LOC123071301 (tae)LOC123079643 (tae)LOC123182317 (tae)LOC123444980 (hvu)LOC123445067 (hvu)
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 2,  cyto_nucl 2,  chlo_mito 2  (predict for NP_191155.1)
Subcellular
localization
TargetP
mito 4,  other 4  (predict for NP_191155.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G55960 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.6 AT2G21120 magnesium transporter, putative (DUF803) [detail] 816647
5.5 BPS1 BPS1-like protein (DUF793) [detail] 839536
5.2 AT3G56050 Protein kinase family protein [detail] 824771
4.7 MAMI membrane-associated mannitol-induced [detail] 835498
Coexpressed
gene list
[Coexpressed gene list for AT3G55960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251773_at
251773_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251773_at
251773_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251773_at
251773_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824762    
Refseq ID (protein) NP_191155.1 


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