[←][→] ath   At3g56650 Gene
functional annotation
Function   thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)      
GO BP
GO:0015979 [list] [network] photosynthesis  (167 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (19 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (46 genes)  IEA  
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0005509 [list] [network] calcium ion binding  (132 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_191224.1 
BLAST NP_191224.1 
Orthologous [Ortholog page] LOC4327544 (osa)  LOC7479651 (ppo)  LOC11417401 (mtr)  LOC100795124 (gma)  LOC100813771 (gma)  LOC101248113 (sly)  LOC103863093 (bra)  LOC123062336 (tae)  LOC123071103 (tae)  LOC123079473 (tae)  LOC123444636 (hvu) 
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for NP_191224.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_191224.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
Genes directly connected with PPD6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.2 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [detail] 838672
9.4 CYP38 cyclophilin 38 [detail] 821137
8.9 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [detail] 818958
8.6 AT3G23700 Nucleic acid-binding proteins superfamily [detail] 821951
8.6 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835431
8.6 AT2G44920 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 819101
8.5 AT1G12250 Pentapeptide repeat-containing protein [detail] 837778
Coexpressed
gene list		 [Coexpressed gene list for PPD6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251701_at
251701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251701_at
251701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251701_at
251701_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824832      
Refseq ID (protein) NP_191224.1 


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