ATTED-II : GeneID search result

[←][→] ath AT3G57410 Gene

functional annotation

Function

villin 3

GO BP

GO:0051014 [list] [network] actin filament severing	(3 genes)	IDA
GO:0051693 [list] [network] actin filament capping	(13 genes)	IEA
GO:0051017 [list] [network] actin filament bundle assembly	(20 genes)	IDA IGI

GO CC

GO:0005884 [list] [network] actin filament	(12 genes)	IDA
GO:0005829 [list] [network] cytosol	(3506 genes)	HDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IDA ISM

GO MF

GO:0051015 [list] [network] actin filament binding

(47 genes)

IDA

KEGG

Protein

NP_001319779.1 NP_001325644.1 NP_001325645.1 NP_001325646.1 NP_001325647.1 NP_001325648.1 NP_001325649.1 NP_001325650.1 NP_001325651.1 NP_567048.1

BLAST

NP_001319779.1 NP_001325644.1 NP_001325645.1 NP_001325646.1 NP_001325647.1 NP_001325648.1 NP_001325649.1 NP_001325650.1 NP_001325651.1 NP_567048.1

Orthologous

[Ortholog page] VLN2 (ath) LOC4332869 (osa) LOC7468985 (ppo) LOC11425184 (mtr) LOC100243579 (vvi) LOC100273789 (zma) LOC100279855 (zma) LOC100787208 (gma) LOC100788765 (gma) LOC100803795 (gma) LOC100807846 (gma) LOC101254959 (sly) LOC101255152 (sly) LOC101268090 (sly) LOC103635078 (zma) LOC103639123 (zma) LOC103841646 (bra) LOC103857995 (bra) LOC103866584 (bra)

Subcellular
localization
wolf

nucl 9, cyto 1, pero 1, cyto_pero 1	(predict for NP_001319779.1)
nucl 8, cyto 1, vacu 1, cysk 1	(predict for NP_001325644.1)
nucl 9, cyto 1, pero 1, cyto_pero 1	(predict for NP_001325645.1)
nucl 9, cyto 1, pero 1, cyto_pero 1	(predict for NP_001325646.1)
nucl 9, cyto 1, pero 1, cyto_pero 1	(predict for NP_001325647.1)
nucl 9, cyto 1, pero 1, cyto_pero 1	(predict for NP_001325648.1)
nucl 9, cyto 1, pero 1, cyto_pero 1	(predict for NP_001325649.1)
nucl 9	(predict for NP_001325650.1)
nucl 9, cyto 1, pero 1, cyto_pero 1	(predict for NP_001325651.1)
nucl 9, cyto 1, pero 1, cyto_pero 1	(predict for NP_567048.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001319779.1)
other 8	(predict for NP_001325644.1)
other 8	(predict for NP_001325645.1)
other 8	(predict for NP_001325646.1)
other 8	(predict for NP_001325647.1)
other 8	(predict for NP_001325648.1)
other 8	(predict for NP_001325649.1)
other 8	(predict for NP_001325650.1)
other 8	(predict for NP_001325651.1)
other 8	(predict for NP_567048.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with VLN3 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.6	XIK	myosin family protein with Dil	[detail]	832171
7.3	PI-4KBETA1	phosphatidylinositol 4-OH kinase beta1	[detail]	836528
6.5	AT2G43160	ENTH/VHS family protein	[detail]	818918
5.2	BIN2	Protein kinase superfamily protein	[detail]	827605

Coexpressed
gene list

[Coexpressed gene list for VLN3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251629_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251629_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251629_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	824908
Refseq ID (protein)	NP_001319779.1
	NP_001325644.1
	NP_001325645.1
	NP_001325646.1
	NP_001325647.1
	NP_001325648.1
	NP_001325649.1
	NP_001325650.1
	NP_001325651.1
	NP_567048.1

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