[←][→] ath   At3g57790 Gene
functional annotation
Function   Pectin lyase-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0008610 [list] [network] lipid biosynthetic process  (657 genes)  IEA  
GO:0044255 [list] [network] cellular lipid metabolic process  (822 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO:0019752 [list] [network] carboxylic acid metabolic process  (1307 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (68 genes)  IEA  
KEGG
Protein NP_001327729.1  NP_567055.1 
BLAST NP_001327729.1  NP_567055.1 
Orthologous [Ortholog page] LOC4347428 (osa)  LOC7468957 (ppo)  LOC11418485 (mtr)  LOC100794954 (gma)  LOC101260208 (sly)  LOC103848548 (bra)  LOC123058892 (tae)  LOC123075099 (tae)  LOC123104158 (tae)  LOC123112396 (tae)  LOC123121917 (tae)  LOC123399373 (hvu)  LOC123440600 (hvu) 
Subcellular
localization
wolf
extr 5,  vacu 3,  chlo 1,  E.R._vacu 1  (predict for NP_001327729.1)
extr 5,  vacu 3,  chlo 1,  E.R._vacu 1  (predict for NP_567055.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_001327729.1)
scret 7  (predict for NP_567055.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G57790 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.1 AT2G16405 Transducin/WD40 repeat-like superfamily protein [detail] 816138
5.0 AT3G57800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 825530
4.7 AT3G14410 Nucleotide/sugar transporter family protein [detail] 820663
Coexpressed
gene list		 [Coexpressed gene list for AT3G57790]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251645_at
251645_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251645_at
251645_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251645_at
251645_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824949      
Refseq ID (protein) NP_001327729.1 
NP_567055.1 


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