ATTED-II : GeneID search result

[←][→] ath At3g57800 Gene

functional annotation

Function

basic helix-loop-helix (bHLH) DNA-binding superfamily protein

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1656 genes)

TAS

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

GO:0003677 [list] [network] DNA binding	(1277 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1576 genes)	ISS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_567057.2 NP_850745.1

BLAST

NP_567057.2 NP_850745.1

Orthologous

[Ortholog page] AT2G42300 (ath) LOC4341525 (osa) LOC7468956 (ppo) LOC11421654 (mtr) LOC11431256 (mtr) LOC18099855 (ppo) PTF1 (gma) LOC100799133 (gma) LOC100810862 (gma) LOC100814124 (gma) LOC101258908 (sly) LOC103830121 (bra) LOC103841682 (bra) LOC103863024 (bra) LOC103866621 (bra) LOC123153536 (tae) LOC123160148 (tae) LOC123165689 (tae) LOC123411689 (hvu)

Subcellular
localization
wolf

nucl 9	(predict for NP_567057.2)
nucl 9	(predict for NP_850745.1)

Subcellular
localization
TargetP

other 8	(predict for NP_567057.2)
other 8	(predict for NP_850745.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G57800 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.1	AT1G61900	uncharacterized protein	[detail]	842486
6.0	AT2G42300	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[detail]	818831
5.0	AT3G57790	Pectin lyase-like superfamily protein	[detail]	824949

Coexpressed
gene list

[Coexpressed gene list for AT3G57800]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251601_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251601_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251601_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	825530
Refseq ID (protein)	NP_567057.2
Refseq ID (protein)	NP_850745.1

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