[←][→] ath   At3g57950 Gene
functional annotation
Function   cotton fiber protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0009620 [list] [network] response to fungus  (999 genes)  IEA  
GO:0043436 [list] [network] oxoacid metabolic process  (1714 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG
Protein NP_191354.1 
BLAST NP_191354.1 
Orthologous [Ortholog page] AT2G42180 (ath)  AT5G06790 (ath)  LOC4346602 (osa)  LOC7479534 (ppo)  LOC7483985 (ppo)  LOC9269403 (osa)  LOC11423658 (mtr)  LOC25483509 (mtr)  LOC100527550 (gma)  LOC100777411 (gma)  LOC100780040 (gma)  LOC100803442 (gma)  LOC101245736 (sly)  LOC103841692 (bra)  LOC103847018 (bra)  LOC103863016 (bra)  LOC103866613 (bra)  LOC123042275 (tae)  LOC123050214 (tae) 
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 1  (predict for NP_191354.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_191354.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis 2
Genes directly connected with AT3G57950 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.3 CML43 calmodulin like 43 [detail] 834473
4.1 AT1G64405 uncharacterized protein [detail] 842749
4.1 GLP9 germin-like protein 9 [detail] 827113
Coexpressed
gene list		 [Coexpressed gene list for AT3G57950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251612_at
251612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251612_at
251612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251612_at
251612_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824964      
Refseq ID (protein) NP_191354.1 


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