[][] ath   At3g59550 Gene
functional annotation
Function   Rad21/Rec8-like family protein
GO BP
GO:0009561 [list] [network] megagametogenesis  (80 genes)  IMP  
GO:0000278 [list] [network] mitotic cell cycle  (86 genes)  IEP  
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM ISS  
GO MF
KEGG
Protein NP_191514.1 
BLAST NP_191514.1 
Orthologous [Ortholog page] LOC4345123 (osa)LOC7486656 (ppo)LOC11427949 (mtr)LOC101261453 (sly)LOC102661287 (gma)LOC103841802 (bra)LOC104646011 (sly)LOC123104425 (tae)LOC123112722 (tae)LOC123116569 (tae)LOC123122201 (tae)LOC123125176 (tae)LOC123399537 (hvu)LOC123399949 (hvu)
Subcellular
localization
wolf
chlo 5,  nucl 4  (predict for NP_191514.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for NP_191514.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 4
Genes directly connected with SYN3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.1 CTF18 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 839431
14.7 BARD1 breast cancer associated RING 1 [detail] 839329
14.7 ETG1 E2F target protein 1 (ETG1) [detail] 818650
14.0 AT3G23740 uncharacterized protein [detail] 821956
13.6 AT1G75150 DNA ligase-like protein [detail] 843852
13.4 AT1G20720 RAD3-like DNA-binding helicase protein [detail] 838662
13.2 AT1G27880 DEAD/DEAH box RNA helicase family protein [detail] 839681
12.2 AT1G26330 DNA binding protein [detail] 839175
12.0 BRCA2(IV) BREAST CANCER 2 like 2A [detail] 828230
11.8 MCM10 minichromosome maintenance 10 [detail] 816632
11.6 AT4G26960 uncharacterized protein [detail] 828803
10.4 AT4G01270 RING/U-box superfamily protein [detail] 828038
10.0 UBP21 ubiquitin-specific protease 21 [detail] 834717
9.9 FANCM DEAD/DEAH box RNA helicase family protein [detail] 840448
7.2 RAD9 cell cycle checkpoint control protein family [detail] 819713
6.2 AT2G46040 ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein [detail] 819212
Coexpressed
gene list
[Coexpressed gene list for SYN3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251485_at
251485_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251485_at
251485_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251485_at
251485_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 825124    
Refseq ID (protein) NP_191514.1 


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