[←][→] ath   AT3G59850 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_001326406.1  NP_191544.2 
BLAST NP_001326406.1  NP_191544.2 
Orthologous [Ortholog page] TAPG1 (sly)  TAPG4 (sly)  TAPG2 (sly)  AT2G43870 (ath)  AT2G43880 (ath)  AT2G43890 (ath)  AT1G05650 (ath)  AT1G05660 (ath)  LOC4326679 (osa)  LOC7464588 (ppo)  LOC7465609 (ppo)  LOC7469534 (ppo)  LOC7469535 (ppo)  LOC11411658 (mtr)  LOC11440395 (mtr)  LOC25500179 (mtr)  LOC100242164 (vvi)  LOC100250754 (vvi)  LOC100273291 (zma)  LOC100782500 (gma)  LOC100784002 (gma)  LOC100785701 (gma)  LOC100786608 (gma)  LOC100789818 (gma)  LOC100793088 (gma)  LOC100797183 (gma)  LOC100806846 (gma)  LOC100854108 (vvi)  TAPG5 (sly)  LOC101249666 (sly)  LOC101249943 (sly)  LOC101252557 (sly)  LOC101259412 (sly)  TPG7 (sly)  LOC101260614 (sly)  LOC101264596 (sly)  LOC101264897 (sly)  LOC101265207 (sly)  TPG6 (sly)  LOC103836520 (bra)  LOC103841831 (bra)  LOC103844104 (bra)  LOC103849973 (bra)  LOC103858105 (bra)  LOC103866111 (bra)  LOC103866112 (bra)  LOC103866113 (bra)  LOC103866751 (bra)  LOC103866752 (bra)  LOC103866753 (bra)  LOC104878208 (vvi)  LOC104878209 (vvi) 
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 2,  cyto_mito 1,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for NP_001326406.1)
extr 5,  chlo 2,  vacu 2  (predict for NP_191544.2)
Subcellular
localization
TargetP
mito 7  (predict for NP_001326406.1)
scret 9  (predict for NP_191544.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
Genes directly connected with AT3G59850 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT2G43880 Pectin lyase-like superfamily protein [detail] 818992
7.9 AT2G41800 imidazolonepropionase (Protein of unknown function, DUF642) [detail] 818779
7.4 EXPA17 expansin A17 [detail] 827983
7.1 AT5G51490 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 835223
6.9 AT2G41810 imidazolonepropionase (Protein of unknown function, DUF642) [detail] 818780
5.3 AT3G46720 UDP-Glycosyltransferase superfamily protein [detail] 823825
4.7 AT2G43870 Pectin lyase-like superfamily protein [detail] 818991
Coexpressed
gene list		 [Coexpressed gene list for AT3G59850]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251434_at
251434_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251434_at
251434_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251434_at
251434_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825155      
Refseq ID (protein) NP_001326406.1 
NP_191544.2 


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