[←][→] ath   AT3G61440 Gene
functional annotation
Function   cysteine synthase C1  
GO BP
GO:0019500 [list] [network] cyanide catabolic process  (1 genes)  IMP  
GO:0051410 [list] [network] detoxification of nitrogen compound  (2 genes)  TAS  
GO:0019499 [list] [network] cyanide metabolic process  (5 genes)  TAS  
GO:0006535 [list] [network] cysteine biosynthetic process from serine  (12 genes)  IBA  
GO:0019344 [list] [network] cysteine biosynthetic process  (22 genes)  IDA  
GO:0080147 [list] [network] root hair cell development  (89 genes)  IMP  
GO:0006955 [list] [network] immune response  (326 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0050017 [list] [network] L-3-cyanoalanine synthase activity  (3 genes)  IDA IMP  
GO:0004124 [list] [network] cysteine synthase activity  (9 genes)  IBA IDA IMP ISS  
GO:0030170 [list] [network] pyridoxal phosphate binding  (84 genes)  IBA  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IDA  
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (121 genes)
ath00460 [list] [network] Cyanoamino acid metabolism (69 genes)
ath00920 [list] [network] Sulfur metabolism (42 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_001078324.1  NP_001190152.1  NP_001327883.1  NP_191703.1 
BLAST NP_001078324.1  NP_001190152.1  NP_001327883.1  NP_191703.1 
Orthologous [Ortholog page] LOC4335048 (osa)  LOC7494093 (ppo)  LOC11436945 (mtr)  OAS-TL3 (gma)  LOC100216722 (zma)  LOC100255091 (vvi)  LOC100806420 (gma)  LOC101253940 (sly)  LOC101255033 (sly)  LOC103841966 (bra)  LOC103862824 (bra) 
Subcellular
localization
wolf
cyto 6,  cysk 2,  chlo 1,  nucl 1  (predict for NP_001078324.1)
cyto 9  (predict for NP_001190152.1)
mito 6,  chlo 4  (predict for NP_001327883.1)
mito 6,  chlo 4  (predict for NP_191703.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001078324.1)
mito 4  (predict for NP_001190152.1)
mito 8  (predict for NP_001327883.1)
mito 8  (predict for NP_191703.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00270 Cysteine and methionine metabolism 4
ath00480 Glutathione metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00020 Citrate cycle (TCA cycle) 2
Genes directly connected with CYSC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 ACO2 ACC oxidase 2 [detail] 842536
5.6 GSH2 glutathione synthetase 2 [detail] 832797
5.4 DPL1 dihydrosphingosine phosphate lyase [detail] 839691
5.2 cICDH cytosolic NADP+-dependent isocitrate dehydrogenase [detail] 842905
5.0 AT1G01490 Heavy metal transport/detoxification superfamily protein [detail] 839440
5.0 SPP2 sucrose-6F-phosphate phosphohydrolase 2 [detail] 824399
Coexpressed
gene list		 [Coexpressed gene list for CYSC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251322_at
251322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251322_at
251322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251322_at
251322_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825317      
Refseq ID (protein) NP_001078324.1 
NP_001190152.1 
NP_001327883.1 
NP_191703.1 


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