[←][→] ath   At3g61710 Gene
functional annotation
Function   AUTOPHAGY 6      
GO BP
GO:0000045 [list] [network] autophagosome assembly  (5 genes)  IGI  
GO:0006623 [list] [network] protein targeting to vacuole  (30 genes)  IGI  
GO:0009846 [list] [network] pollen germination  (80 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IEP  
GO CC
GO:0000407 [list] [network] phagophore assembly site  (1 genes)  IDA  
GO:0005942 [list] [network] phosphatidylinositol 3-kinase complex  (5 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04136 [list] [network] Autophagy - other (41 genes)
Protein NP_001030914.1  NP_001327722.1  NP_567116.1  NP_974475.1 
BLAST NP_001030914.1  NP_001327722.1  NP_567116.1  NP_974475.1 
Orthologous [Ortholog page] LOC543059 (tae)  ATG6 (gma)  atg6 (sly)  LOC4324394 (osa)  LOC4333557 (osa)  LOC7457395 (ppo)  LOC9271973 (osa)  LOC11414676 (mtr)  LOC100812721 (gma)  LOC103830319 (bra)  LOC123061865 (tae)  LOC123070560 (tae)  LOC123444118 (hvu) 
Subcellular
localization
wolf
chlo 3,  plas 2,  golg 2,  golg_plas 2  (predict for NP_001030914.1)
cyto 5,  nucl 2,  cysk 1,  nucl_plas 1  (predict for NP_001327722.1)
cyto 5,  nucl 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_567116.1)
nucl 3,  cyto 3,  cyto_nucl 3,  E.R. 1,  cysk_nucl 1,  cyto_pero 1  (predict for NP_974475.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for NP_001030914.1)
other 9  (predict for NP_001327722.1)
other 9  (predict for NP_567116.1)
other 9  (predict for NP_974475.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
Genes directly connected with ATG6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 AT3G55070 LisH/CRA/RING-U-box domains-containing protein [detail] 824673
6.7 AT3G43230 RING/FYVE/PHD-type zinc finger family protein [detail] 823398
6.7 Cand2 Protein of unknown function, transmembrane-40 [detail] 819662
6.5 AT4G11860 FAM63A-like protein (DUF544) [detail] 826793
5.4 AT3G14075 Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 [detail] 820623
Coexpressed
gene list		 [Coexpressed gene list for ATG6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251286_at
251286_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251286_at
251286_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251286_at
251286_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825344      
Refseq ID (protein) NP_001030914.1 
NP_001327722.1 
NP_567116.1 
NP_974475.1 


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