[←][→] ath   At3g61860 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein      
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (105 genes)  IDA  
GO:0008380 [list] [network] RNA splicing  (191 genes)  NAS  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (14 genes)  TAS  
GO:0016607 [list] [network] nuclear speck  (50 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_567120.1 
BLAST NP_567120.1 
Orthologous [Ortholog page] RS31a (ath)  RS40 (ath)  RS41 (ath)  LOC4328133 (osa)  LOC4334964 (osa)  LOC7454468 (ppo)  LOC7464900 (ppo)  LOC7482121 (ppo)  LOC7492794 (ppo)  LOC7494037 (ppo)  LOC7497271 (ppo)  LOC11422261 (mtr)  LOC11445062 (mtr)  LOC25500953 (mtr)  LOC100781534 (gma)  LOC100796509 (gma)  LOC100797709 (gma)  LOC100797778 (gma)  LOC100801043 (gma)  LOC100815452 (gma)  LOC101246991 (sly)  LOC101258786 (sly)  LOC101263057 (sly)  LOC101264097 (sly)  LOC101266564 (sly)  LOC103834867 (bra)  LOC103857154 (bra)  LOC103863268 (bra)  LOC103866451 (bra)  LOC123050970 (tae)  LOC123094071 (tae)  LOC123099280 (tae)  LOC123106211 (tae)  LOC123131876 (tae)  LOC123135841 (tae)  LOC123143365 (tae)  LOC123186938 (tae)  LOC123401142 (hvu)  LOC123431480 (hvu)  LOC123450013 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_567120.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_567120.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
Genes directly connected with RS31 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.4 SR34 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 839262
7.9 SCL33 SC35-like splicing factor 33 [detail] 841976
7.7 AT3G59470 Far-red impaired responsive (FAR1) family protein [detail] 825116
7.6 AT4G35785 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 829732
6.0 GIF2 GRF1-interacting factor 2 [detail] 839278
5.8 ERCC1 nucleotide repair protein [detail] 819685
5.6 RS31a RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 819273
Coexpressed
gene list		 [Coexpressed gene list for RS31]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251242_at
251242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251242_at
251242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251242_at
251242_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825359      
Refseq ID (protein) NP_567120.1 


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