[←][→] ath   AT3G62080 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0007034 [list] [network] vacuolar transport  (89 genes)  IEA  
GO:0010150 [list] [network] leaf senescence  (111 genes)  ISS  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001078328.1  NP_567125.1 
BLAST NP_001078328.1  NP_567125.1 
Orthologous [Ortholog page] LOC4327915 (osa)  LOC7481450 (ppo)  LOC11426637 (mtr)  LOC100259014 (vvi)  LOC100274253 (zma)  LOC100783674 (gma)  LOC101259667 (sly)  LOC102663008 (gma)  LOC103842036 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 1,  nucl_plas 1  (predict for NP_001078328.1)
cyto 6,  chlo 1,  nucl 1  (predict for NP_567125.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001078328.1)
other 9  (predict for NP_567125.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT3G62080 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.2 AT1G61970 Mitochondrial transcription termination factor family protein [detail] 842492
5.2 FRS4 FAR1-related sequence 4 [detail] 843965
5.0 AT5G15270 RNA-binding KH domain-containing protein [detail] 831379
Coexpressed
gene list		 [Coexpressed gene list for AT3G62080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251262_at
251262_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251262_at
251262_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251262_at
251262_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825381      
Refseq ID (protein) NP_001078328.1 
NP_567125.1 


The preparation time of this page was 0.1 [sec].