[←][→] ath   AT3G62110 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG
Protein NP_001326987.1  NP_567126.1 
BLAST NP_001326987.1  NP_567126.1 
Orthologous [Ortholog page] LOC4334689 (osa)  LOC4342825 (osa)  LOC7455388 (ppo)  LOC7481446 (ppo)  LOC11408219 (mtr)  LOC11435313 (mtr)  LOC100260519 (vvi)  LOC100285112 (zma)  LOC100501436 (zma)  LOC100778981 (gma)  LOC100782602 (gma)  LOC100786985 (gma)  LOC100817309 (gma)  LOC103830340 (bra)  LOC103842039 (bra) 
Subcellular
localization
wolf
vacu 4,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001326987.1)
vacu 4,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_567126.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001326987.1)
scret 9  (predict for NP_567126.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G62110 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.1 AT5G40830 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 834083
4.9 AT1G55360 tRNA-splicing ligase (DUF239) [detail] 841982
4.8 AT5G05830 RING/FYVE/PHD zinc finger superfamily protein [detail] 830468
4.0 AT3G05160 Major facilitator superfamily protein [detail] 819679
4.0 FRUCT5 beta-fructofuranosidase 5 [detail] 841955
Coexpressed
gene list		 [Coexpressed gene list for AT3G62110]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251261_at
251261_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251261_at
251261_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251261_at
251261_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825384      
Refseq ID (protein) NP_001326987.1 
NP_567126.1 


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