[←][→] ath   AT3G62170 Gene
functional annotation
Function   VANGUARD-like protein  
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO:0042545 [list] [network] cell wall modification  (176 genes)  IEA  
GO CC
GO:0090406 [list] [network] pollen tube  (80 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0045330 [list] [network] aspartyl esterase activity  (67 genes)  IEA  
GO:0046910 [list] [network] pectinesterase inhibitor activity  (84 genes)  IBA  
GO:0030599 [list] [network] pectinesterase activity  (86 genes)  IBA  
KEGG
Protein NP_191776.1 
BLAST NP_191776.1 
Orthologous [Ortholog page] LOC542462 (zma)  AT2G26450 (ath)  VGDH1 (ath)  VGD1 (ath)  AT4G33230 (ath)  LOC4336041 (osa)  LOC4345723 (osa)  LOC4347136 (osa)  LOC7473014 (ppo)  LOC7476661 (ppo)  LOC7478125 (ppo)  LOC7480780 (ppo)  LOC7486688 (ppo)  LOC11413863 (mtr)  LOC11415886 (mtr)  LOC11417435 (mtr)  LOC11425912 (mtr)  LOC11434543 (mtr)  LOC11444976 (mtr)  LOC11445516 (mtr)  LOC100194282 (zma)  LOC100241799 (vvi)  LOC100242515 (vvi)  LOC100245002 (vvi)  LOC100257766 (vvi)  LOC100383399 (zma)  LOC100384243 (zma)  LOC100775225 (gma)  LOC100775246 (gma)  LOC100781507 (gma)  LOC100784679 (gma)  LOC100789650 (gma)  LOC100793421 (gma)  LOC100796485 (gma)  LOC100807628 (gma)  LOC100808559 (gma)  LOC100815015 (gma)  LOC100820142 (gma)  LOC101244677 (sly)  LOC101253120 (sly)  LOC101259781 (sly)  LOC103830347 (bra)  LOC103842042 (bra)  LOC103858231 (bra)  LOC103858354 (bra)  LOC103862227 (bra)  LOC103862797 (bra)  LOC103866319 (bra)  LOC103866408 (bra)  LOC107546770 (zma)  LOC112416103 (mtr) 
Subcellular
localization
wolf
E.R. 4,  cyto 1,  extr 1,  golg 1,  chlo 1,  vacu 1,  pero 1,  cyto_nucl 1,  golg_plas 1,  cyto_plas 1  (predict for NP_191776.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_191776.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 3
Genes directly connected with VGDH2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.8 VGDH1 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 819317
17.1 VGD1 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 819318
16.7 RALFL8 ralf-like 8 [detail] 842451
12.5 AT1G29140 Pollen Ole e 1 allergen and extensin family protein [detail] 839788
10.8 AT3G26110 Anther-specific protein agp1-like protein [detail] 822209
10.7 AT5G61720 hypothetical protein (DUF1216) [detail] 836294
10.6 sks13 SKU5 similar 13 [detail] 820540
9.9 AT3G28980 mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) [detail] 822538
8.4 AGP23 arabinogalactan protein 23 [detail] 824938
6.8 AGP6 arabinogalactan protein 6 [detail] 831289
Coexpressed
gene list		 [Coexpressed gene list for VGDH2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251258_at
251258_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251258_at
251258_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251258_at
251258_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825390      
Refseq ID (protein) NP_191776.1 


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