ATTED-II : GeneID search result

[←][→] ath At3g62290 Gene

functional annotation

Function

ADP-ribosylation factor A1E

GO BP

GO CC

GO:0000325 [list] [network] plant-type vacuole	(785 genes)	HDA
GO:0009506 [list] [network] plasmodesma	(871 genes)	HDA
GO:0005794 [list] [network] Golgi apparatus	(1182 genes)	HDA ISM
GO:0005829 [list] [network] cytosol	(2559 genes)	HDA RCA

GO MF

GO:0016004 [list] [network] phospholipase activator activity	(6 genes)	TAS
GO:0005525 [list] [network] GTP binding	(70 genes)	ISS TAS
GO:0003729 [list] [network] mRNA binding	(1535 genes)	IDA

KEGG

ath04144 [list] [network] Endocytosis (158 genes)

Protein

NP_001190161.1 NP_001190162.1 NP_191788.1

BLAST

NP_001190161.1 NP_001190162.1 NP_191788.1

Orthologous

[Ortholog page] LOC543361 (tae) ARF (gma) ARF1A1C (ath) ARFA1B (ath) ARFA1F (ath) ARF1 (ath) ARFA1D (ath) LOC4326208 (osa) LOC4327591 (osa) LOC4334545 (osa) LOC4339157 (osa) LOC4342745 (osa) LOC4342746 (osa) LOC7465227 (ppo) LOC7476402 (ppo) LOC7478883 (ppo) LOC7481423 (ppo) LOC7485865 (ppo) LOC7495198 (ppo) LOC7498230 (ppo) LOC11406279 (mtr) LOC11408220 (mtr) LOC11416588 (mtr) LOC11430247 (mtr) LOC11433594 (mtr) LOC18098508 (ppo) LOC18098509 (ppo) LOC25494605 (mtr) LOC100305887 (gma) LOC100306021 (gma) LOC100499890 (gma) LOC100527744 (gma) LOC100778623 (gma) LOC100781846 (gma) LOC100789436 (gma) LOC100796123 (gma) LOC100797931 (gma) LOC100807631 (gma) LOC100808042 (gma) LOC101246230 (sly) LOC101247318 (sly) LOC101248063 (sly) LOC101249410 (sly) LOC101250243 (sly) LOC101260126 (sly) LOC103829270 (bra) LOC103830882 (bra) LOC103831579 (bra) LOC103835663 (bra) LOC103838507 (bra) LOC103843841 (bra) LOC103846468 (bra) LOC103852654 (bra) LOC103858238 (bra) LOC103862786 (bra) LOC103866400 (bra) LOC104644826 (sly) LOC117127880 (bra) LOC123052765 (tae) LOC123062386 (tae) LOC123071160 (tae) LOC123103121 (tae) LOC123105601 (tae) LOC123111312 (tae) LOC123113912 (tae) LOC123120421 (tae) LOC123188567 (tae) LOC123395716 (hvu) LOC123426117 (hvu) LOC123444310 (hvu) LOC123444675 (hvu) LOC123452946 (hvu)

Subcellular
localization
wolf

cyto 4, cyto_E.R. 3, pero 3, cyto_nucl 2, E.R. 1	(predict for NP_001190161.1)
cyto 4, cyto_E.R. 3, pero 3, cyto_nucl 2, E.R. 1	(predict for NP_001190162.1)
cyto 4, cyto_E.R. 3, pero 3, cyto_nucl 2, E.R. 1	(predict for NP_191788.1)

Subcellular
localization
TargetP

scret 5, other 5	(predict for NP_001190161.1)
scret 5, other 5	(predict for NP_001190162.1)
scret 5, other 5	(predict for NP_191788.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

Genes directly connected with ARFA1E on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
16.4	TCTP	translationally controlled tumor protein	[detail]	820916
12.1	AT1G51200	A20/AN1-like zinc finger family protein	[detail]	841543
11.8	AT4G09830	nuclear receptor family 2 group C protein	[detail]	826572
11.3	UBC10	ubiquitin-conjugating enzyme 10	[detail]	835411
10.8	ACT8	actin 8	[detail]	841347
10.7	UBC28	ubiquitin-conjugating enzyme 28	[detail]	842728
10.5	WLIM2b	GATA type zinc finger transcription factor family protein	[detail]	824743
10.2	AT5G43460	HR-like lesion-inducing protein-like protein	[detail]	834366
8.7	MTN1	methylthioadenosine nucleosidase 1	[detail]	830035

Coexpressed
gene list

[Coexpressed gene list for ARFA1E]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251257_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251257_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251257_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	825402
Refseq ID (protein)	NP_001190161.1
	NP_001190162.1
	NP_191788.1

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