[←][→] ath   At3g62840 Gene
functional annotation
Function   Small nuclear ribonucleoprotein family protein  
GO BP
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0030532 [list] [network] small nuclear ribonucleoprotein complex  (21 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001078331.1  NP_567134.3 
BLAST NP_001078331.1  NP_567134.3 
Orthologous [Ortholog page] AT2G47640 (ath)  LOC4338385 (osa)  LOC7478843 (ppo)  LOC7491301 (ppo)  LOC11425290 (mtr)  LOC11426500 (mtr)  LOC100500203 (gma)  LOC100792526 (gma)  LOC100793233 (gma)  LOC101246377 (sly)  LOC103830369 (bra)  LOC103842086 (bra)  LOC103862772 (bra)  LOC123063612 (tae)  LOC123072757 (tae)  LOC123080932 (tae)  LOC123093863 (tae)  LOC123099084 (tae)  LOC123106044 (tae)  LOC123441091 (hvu)  LOC123449942 (hvu) 
Subcellular
localization
wolf
cyto 4,  extr 3,  chlo 2,  nucl 1  (predict for NP_001078331.1)
cyto 4,  chlo 3,  extr 2,  nucl 1,  chlo_mito 1  (predict for NP_567134.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001078331.1)
other 8  (predict for NP_567134.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03010 Ribosome 3
ath03018 RNA degradation 2
ath03020 RNA polymerase 2
Genes directly connected with AT3G62840 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.4 RUXF small nuclear ribonucleoprotein F [detail] 829145
7.2 TIM9 Tim10/DDP family zinc finger protein [detail] 823809
6.9 MAGO mago nashi family protein [detail] 837560
Coexpressed
gene list		 [Coexpressed gene list for AT3G62840]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251184_at
251184_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251184_at
251184_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251184_at
251184_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825459      
Refseq ID (protein) NP_001078331.1 
NP_567134.3 


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