[][] ath   AT3G63140 Gene
functional annotation
Function   chloroplast stem-loop binding protein of 41 kDa
GO BP
GO:0033499 [list] [network] galactose catabolic process via UDP-galactose  (14 genes)  IBA  
GO:0019388 [list] [network] galactose catabolic process  (16 genes)  IBA  
GO:0032544 [list] [network] plastid translation  (16 genes)  IMP  
GO:0045727 [list] [network] positive regulation of translation  (26 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IGI  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IMP  
GO CC
GO:0010287 [list] [network] plastoglobule  (68 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO MF
GO:0003978 [list] [network] UDP-glucose 4-epimerase activity  (11 genes)  IBA  
GO:0008266 [list] [network] poly(U) RNA binding  (28 genes)  IDA  
GO:0019843 [list] [network] rRNA binding  (99 genes)  IEA  
GO:0050662 [list] [network] coenzyme binding  (416 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_191873.1 
BLAST NP_191873.1 
Orthologous [Ortholog page] LOC544217 (sly)LOC4342714 (osa)LOC7464675 (ppo)LOC7480043 (ppo)LOC11429745 (mtr)LOC100266662 (vvi)LOC100795966 (gma)LOC100816596 (gma)LOC103632122 (zma)LOC103862714 (bra)
Subcellular
localization
wolf
chlo 10  (predict for NP_191873.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_191873.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath01230 Biosynthesis of amino acids 4
ath00260 Glycine, serine and threonine metabolism 3
ath00010 Glycolysis / Gluconeogenesis 2
ath00710 Carbon fixation in photosynthetic organisms 2
Genes directly connected with CSP41A on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
11.4 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 824000
10.7 PGK1 phosphoglycerate kinase 1 [detail] 820461
10.3 LrgB membrane protein [detail] 840100
9.9 TAPX thylakoidal ascorbate peroxidase [detail] 844085
9.5 AT1G52510 alpha/beta-Hydrolases superfamily protein [detail] 841682
7.0 AT4G39970 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 830158
6.3 AT3G19480 D-3-phosphoglycerate dehydrogenase [detail] 821482
Coexpressed
gene list
[Coexpressed gene list for CSP41A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251157_at
251157_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251157_at
251157_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251157_at
251157_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 825489    
Refseq ID (protein) NP_191873.1 


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