[←][→] ath   At3g63140 Gene
functional annotation
Function   chloroplast stem-loop binding protein of 41 kDa    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045727 [list] [network] positive regulation of translation  (8 genes)  IMP  
GO:0032544 [list] [network] plastid translation  (21 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  ISS  
GO:0006364 [list] [network] rRNA processing  (169 genes)  IGI  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  ISS  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  IMP  
GO CC
GO:0010319 [list] [network] stromule  (37 genes)  ISS  
GO:0010287 [list] [network] plastoglobule  (57 genes)  HDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0005840 [list] [network] ribosome  (322 genes)  ISS  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0008266 [list] [network] poly(U) RNA binding  (19 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_191873.1 
BLAST NP_191873.1 
Orthologous [Ortholog page] LOC544217 (sly)  LOC4342714 (osa)  LOC7464675 (ppo)  LOC7480043 (ppo)  LOC11429745 (mtr)  LOC100795966 (gma)  LOC100816596 (gma)  LOC103862714 (bra)  LOC123131677 (tae)  LOC123135495 (tae)  LOC123143070 (tae)  LOC123401890 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_191873.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_191873.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 8
ath00710 Carbon fixation in photosynthetic organisms 5
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00910 Nitrogen metabolism 2
Genes directly connected with CSP41A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.7 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 824000
11.2 LrgB uncharacterized protein [detail] 840100
10.8 HCEF1 high cyclic electron flow 1 [detail] 824572
10.6 CA1 carbonic anhydrase 1 [detail] 821134
9.8 TAPX thylakoidal ascorbate peroxidase [detail] 844085
9.3 AT1G52510 alpha/beta-Hydrolases superfamily protein [detail] 841682
7.4 AT4G39970 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 830158
6.9 AT3G19480 D-3-phosphoglycerate dehydrogenase [detail] 821482
Coexpressed
gene list		 [Coexpressed gene list for CSP41A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251157_at
251157_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251157_at
251157_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251157_at
251157_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825489      
Refseq ID (protein) NP_191873.1 


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