[←][→] ath   AT3G63520 Gene
functional annotation
Function   carotenoid cleavage dioxygenase 1  
GO BP
GO:0016118 [list] [network] carotenoid catabolic process  (3 genes)  IDA  
GO:0016124 [list] [network] xanthophyll catabolic process  (3 genes)  IMP  
GO:0016121 [list] [network] carotene catabolic process  (9 genes)  IBA IMP  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IEP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IBA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0045549 [list] [network] 9-cis-epoxycarotenoid dioxygenase activity  (7 genes)  IDA  
GO:0010436 [list] [network] carotenoid dioxygenase activity  (9 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_191911.1 
BLAST NP_191911.1 
Orthologous [Ortholog page] CCD1A (sly)  CCD1B (sly)  LOC732715 (zma)  LOC4352923 (osa)  LOC25501059 (mtr)  LOC25501062 (mtr)  LOC25501064 (mtr)  LOC25501065 (mtr)  CCD1 (vvi)  LOC100249903 (vvi)  LOC100789210 (gma)  LOC103862738 (bra) 
Subcellular
localization
wolf
cyto 6,  mito 1,  pero 1  (predict for NP_191911.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_191911.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
Genes directly connected with CCD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 FTSH1 FTSH protease 1 [detail] 841447
7.4 AT3G24190 Protein kinase superfamily protein [detail] 822005
7.1 FTSH8 FTSH protease 8 [detail] 837154
7.0 CRL crumpled leaf [detail] 835175
5.3 AT5G53850 haloacid dehalogenase-like hydrolase family protein [detail] 835466
4.7 AT1G06650 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 837175
Coexpressed
gene list		 [Coexpressed gene list for CCD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251146_at
251146_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251146_at
251146_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251146_at
251146_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825527      
Refseq ID (protein) NP_191911.1 


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