ATTED-II : GeneID search result

[←][→] ath At4g00200 Gene

functional annotation

Function

AT hook motif DNA-binding family protein

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

GO:0003680 [list] [network] minor groove of adenine-thymine-rich DNA binding

(19 genes)

IEA

KEGG

Protein

NP_001329621.1 NP_191931.2

BLAST

NP_001329621.1 NP_191931.2

Orthologous

[Ortholog page] AHL1 (ath) AT4G22770 (ath) LOC4344529 (osa) LOC7464863 (ppo) LOC7482139 (ppo) LOC7494006 (ppo) LOC11408694 (mtr) LOC11422923 (mtr) LOC18094419 (ppo) LOC25484486 (mtr) LOC25498874 (mtr) LOC25501022 (mtr) LOC100776862 (gma) LOC100777213 (gma) LOC100789179 (gma) LOC100791563 (gma) LOC100793726 (gma) LOC100794202 (gma) LOC100796830 (gma) LOC100801730 (gma) LOC100803208 (gma) LOC101246253 (sly) LOC101247787 (sly) LOC101253722 (sly) LOC101260750 (sly) LOC101268706 (sly) LOC102667678 (gma) LOC103836939 (bra) LOC103853493 (bra) LOC103860329 (bra) LOC103861330 (bra) LOC123147513 (tae) LOC123160221 (tae) LOC123167718 (tae) LOC123410818 (hvu)

Subcellular
localization
wolf

nucl 3, chlo 2, plas 2, vacu 1, chlo_mito 1, cysk_nucl 1, mito_plas 1, cyto_plas 1	(predict for NP_001329621.1)
nucl 3, chlo 2, plas 2, vacu 1, chlo_mito 1, cysk_nucl 1, mito_plas 1, cyto_plas 1	(predict for NP_191931.2)

Subcellular
localization
TargetP

other 6, chlo 4	(predict for NP_001329621.1)
other 6, chlo 4	(predict for NP_191931.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G00200 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.7	AT5G51590	AT hook motif DNA-binding family protein	[detail]	835233
5.1	AT5G62260	AT hook motif DNA-binding family protein	[detail]	836347
4.9	AT3G63290	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	825504
4.7	SK13	shaggy-like kinase 13	[detail]	831316
3.1	NAC060	NAC domain containing protein 60	[detail]	823554

Coexpressed
gene list

[Coexpressed gene list for AT4G00200]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

255700_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

255700_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

255700_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828162
Refseq ID (protein)	NP_001329621.1
Refseq ID (protein)	NP_191931.2

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