[←][→] ath   At4g02020 Gene
functional annotation
Function   SET domain-containing protein      
GO BP
GO:0070734 [list] [network] histone H3-K27 methylation  (13 genes)  IMP  
GO:0006349 [list] [network] regulation of gene expression by genomic imprinting  (15 genes)  IMP  
GO:0043966 [list] [network] histone H3 acetylation  (17 genes)  ISS  
GO:0010048 [list] [network] vernalization response  (18 genes)  IMP  
GO:1990110 [list] [network] callus formation  (29 genes)  IGI  
GO:0009960 [list] [network] endosperm development  (37 genes)  IGI  
GO:1900055 [list] [network] regulation of leaf senescence  (53 genes)  IGI  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IGI  
GO CC
GO:0005677 [list] [network] chromatin silencing complex  (8 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003727 [list] [network] single-stranded RNA binding  (55 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00310 [list] [network] Lysine degradation (31 genes)
Protein NP_001328435.1  NP_001328436.1  NP_001328437.1  NP_567221.1 
BLAST NP_001328435.1  NP_001328436.1  NP_001328437.1  NP_567221.1 
Orthologous [Ortholog page] LOC4332612 (osa)  LOC7455428 (ppo)  LOC7481403 (ppo)  LOC11427647 (mtr)  EZ1 (sly)  LOC100795451 (gma)  LOC100808730 (gma)  LOC103836786 (bra)  LOC106798111 (gma)  LOC123085669 (tae)  LOC123092326 (tae)  LOC123097675 (tae)  LOC123448823 (hvu) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001328435.1)
nucl 8,  cyto 1  (predict for NP_001328436.1)
nucl 8,  cyto 1  (predict for NP_001328437.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_567221.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001328435.1)
other 9  (predict for NP_001328436.1)
other 9  (predict for NP_001328437.1)
other 9  (predict for NP_567221.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00511 Other glycan degradation 2
Genes directly connected with SWN on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.4 DCL4 dicer-like 4 [detail] 832154
6.1 MAP65-7 microtubule-associated protein 65-7 [detail] 838034
5.8 AT4G15840 BTB/POZ domain-containing protein [detail] 827265
4.9 AT3G26720 Glycosyl hydrolase family 38 protein [detail] 822284
Coexpressed
gene list		 [Coexpressed gene list for SWN]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255510_at
255510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255510_at
255510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255510_at
255510_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828165      
Refseq ID (protein) NP_001328435.1 
NP_001328436.1 
NP_001328437.1 
NP_567221.1 


The preparation time of this page was 0.1 [sec].