[←][→] ath   At4g04920 Gene
functional annotation
Function   sensitive to freezing 6      
GO BP
GO:2001011 [list] [network] positive regulation of plant-type cell wall cellulose biosynthetic process  (1 genes)  IMP  
GO:1905499 [list] [network] trichome papilla formation  (3 genes)  IMP  
GO:1902066 [list] [network] regulation of cell wall pectin metabolic process  (5 genes)  IGI  
GO:1901672 [list] [network] positive regulation of systemic acquired resistance  (6 genes)  IMP  
GO:2001009 [list] [network] regulation of plant-type cell wall cellulose biosynthetic process  (6 genes)  IGI  
GO:0032922 [list] [network] circadian regulation of gene expression  (9 genes)  IMP  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (11 genes)  IDA  
GO:2000022 [list] [network] regulation of jasmonic acid mediated signaling pathway  (28 genes)  IMP  
GO:0010104 [list] [network] regulation of ethylene-activated signaling pathway  (30 genes)  IMP  
GO:0010091 [list] [network] trichome branching  (31 genes)  IMP  
GO:0048586 [list] [network] regulation of long-day photoperiodism, flowering  (32 genes)  IMP  
GO:0009631 [list] [network] cold acclimation  (59 genes)  IMP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  IMP  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (159 genes)  IDA  
GO:0006970 [list] [network] response to osmotic stress  (883 genes)  IMP  
GO:0048364 [list] [network] root development  (1192 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA IMP  
GO CC
GO:0016592 [list] [network] mediator complex  (43 genes)  IDA IEA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (62 genes)  IDA  
KEGG
Protein NP_001190676.1  NP_001329057.1  NP_192401.5 
BLAST NP_001190676.1  NP_001329057.1  NP_192401.5 
Orthologous [Ortholog page] LOC4349021 (osa)  LOC7477418 (ppo)  LOC7490820 (ppo)  LOC18102996 (ppo)  LOC25493186 (mtr)  LOC100793949 (gma)  LOC100812938 (gma)  LOC101267765 (sly)  LOC103839801 (bra)  LOC123047374 (tae)  LOC123122861 (tae)  LOC123181237 (tae)  LOC123432911 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001190676.1)
nucl 10  (predict for NP_001329057.1)
nucl 10  (predict for NP_192401.5)
Subcellular
localization
TargetP
other 9  (predict for NP_001190676.1)
other 9  (predict for NP_001329057.1)
other 9  (predict for NP_192401.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with SFR6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 KAK HECT ubiquitin protein ligase family protein KAK [detail] 830017
5.9 AT5G51340 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835208
5.7 KEG protein kinases;ubiquitin-protein ligase [detail] 831197
Coexpressed
gene list		 [Coexpressed gene list for SFR6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255309_at
255309_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255309_at
255309_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255309_at
255309_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825831      
Refseq ID (protein) NP_001190676.1 
NP_001329057.1 
NP_192401.5 


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