[←][→] ath   AT4G10340 Gene
functional annotation
Function   light harvesting complex of photosystem II 5  
GO BP
GO:0010196 [list] [network] nonphotochemical quenching  (11 genes)  IMP  
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (21 genes)  IBA  
GO:0010207 [list] [network] photosystem II assembly  (25 genes)  IMP  
GO:0018298 [list] [network] protein-chromophore linkage  (38 genes)  IEA  
GO:0010218 [list] [network] response to far red light  (54 genes)  IEP  
GO:0010114 [list] [network] response to red light  (74 genes)  IEP  
GO:0009637 [list] [network] response to blue light  (98 genes)  IEP  
GO:0015979 [list] [network] photosynthesis  (206 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (700 genes)  IBA  
GO CC
GO:0009783 [list] [network] photosystem II antenna complex  (2 genes)  IMP  
GO:0009517 [list] [network] PSII associated light-harvesting complex II  (7 genes)  IDA  
GO:0009533 [list] [network] chloroplast stromal thylakoid  (8 genes)  IDA  
GO:0009522 [list] [network] photosystem I  (35 genes)  IEA  
GO:0010287 [list] [network] plastoglobule  (68 genes)  IBA IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IBA IDA  
GO:0042651 [list] [network] thylakoid membrane  (391 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0016168 [list] [network] chlorophyll binding  (27 genes)  IEA ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00196 [list] [network] Photosynthesis - antenna proteins (22 genes)
Protein NP_192772.1 
BLAST NP_192772.1 
Orthologous [Ortholog page] LOC542320 (zma)  LOC542716 (zma)  LOC4350176 (osa)  LOC25496571 (mtr)  LOC100246457 (vvi)  LOC100806585 (gma)  LOC100820327 (gma)  CAB9 (sly)  LOC103838910 (bra)  LOC103858561 (bra) 
Subcellular
localization
wolf
chlo 8,  cyto 1,  vacu 1,  pero 1,  cyto_pero 1  (predict for NP_192772.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_192772.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 10
ath00196 Photosynthesis - antenna proteins 8
Genes directly connected with LHCB5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
22.3 LHCA3 PSI type III chlorophyll a/b-binding protein [detail] 842446
21.5 LHCB3 light-harvesting chlorophyll B-binding protein 3 [detail] 835515
20.2 LHCA4 light-harvesting chlorophyll-protein complex I subunit A4 [detail] 823901
19.9 PSBP-1 photosystem II subunit P-1 [detail] 837178
17.3 PSBW photosystem II reaction center W [detail] 817606
13.7 PSAN photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN) [detail] 836525
13.2 CRD1 dicarboxylate diiron protein, putative (Crd1) [detail] 824861
10.3 APE2 Glucose-6-phosphate/phosphate translocator-like protein [detail] 834652
Coexpressed
gene list		 [Coexpressed gene list for LHCB5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254970_at
254970_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254970_at
254970_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254970_at
254970_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826626      
Refseq ID (protein) NP_192772.1 


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