[←][→] ath   AT4G13780 Gene
functional annotation
Function   methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS  
GO BP
GO:0006431 [list] [network] methionyl-tRNA aminoacylation  (2 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA TAS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004825 [list] [network] methionine-tRNA ligase activity  (2 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (23 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00450 [list] [network] Selenocompound metabolism (18 genes)
ath00970 [list] [network] Aminoacyl-tRNA biosynthesis (94 genes)
Protein NP_193114.1 
BLAST NP_193114.1 
Orthologous [Ortholog page] LOC4341140 (osa)  LOC4348562 (osa)  LOC7495848 (ppo)  LOC11422324 (mtr)  LOC11441226 (mtr)  LOC100253638 (vvi)  LOC100257273 (vvi)  LOC100786507 (gma)  LOC100809861 (gma)  LOC101263723 (sly)  LOC103632740 (zma)  LOC103639438 (zma)  LOC103654058 (zma)  LOC103833414 (bra)  LOC103863598 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  E.R. 3  (predict for NP_193114.1)
Subcellular
localization
TargetP
other 8  (predict for NP_193114.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 6
ath03013 RNA transport 5
Genes directly connected with AT4G13780 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 TWN2 valyl-tRNA synthetase / valine-tRNA ligase (VALRS) [detail] 838023
8.5 ABCF3 general control non-repressible 3 [detail] 842763
8.2 EIF3E eukaryotic translation initiation factor 3E [detail] 824896
5.6 MAD1 mitotic checkpoint family protein [detail] 835051
Coexpressed
gene list		 [Coexpressed gene list for AT4G13780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254734_at
254734_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254734_at
254734_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254734_at
254734_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827012      
Refseq ID (protein) NP_193114.1 


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