[←][→] ath   AT4G14210 Gene
functional annotation
Function   phytoene desaturase 3  
GO BP
GO:0016120 [list] [network] carotene biosynthetic process  (7 genes)  IDA  
GO:0016117 [list] [network] carotenoid biosynthetic process  (34 genes)  IBA IDA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IDA IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IBA IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM TAS  
GO:0016020 [list] [network] membrane  (7839 genes)  IEA  
GO MF
GO:0016166 [list] [network] phytoene dehydrogenase activity  (1 genes)  IBA IDA  
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IBA  
KEGG ath00906 [list] [network] Carotenoid biosynthesis (29 genes)
Protein NP_001319934.1  NP_001329033.1  NP_193157.1 
BLAST NP_001319934.1  NP_001329033.1  NP_193157.1 
Orthologous [Ortholog page] LOC542329 (zma)  pds (sly)  PDS1 (gma)  LOC4331854 (osa)  LOC11432737 (mtr)  LOC100127420 (gma)  PDS1 (vvi)  LOC103835193 (bra)  PDS (bra) 
Subcellular
localization
wolf
chlo 7,  cyto 3  (predict for NP_001319934.1)
chlo 7,  cyto 3  (predict for NP_001329033.1)
chlo 7,  cyto 3  (predict for NP_193157.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001319934.1)
chlo 3  (predict for NP_001329033.1)
chlo 3  (predict for NP_193157.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
ath00906 Carotenoid biosynthesis 2
Genes directly connected with PDS3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.5 AT5G08650 Small GTP-binding protein [detail] 830766
8.9 PREP1 presequence protease 1 [detail] 821451
8.4 AT1G79600 Protein kinase superfamily protein [detail] 844298
Coexpressed
gene list		 [Coexpressed gene list for PDS3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245284_at
245284_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245284_at
245284_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245284_at
245284_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827061      
Refseq ID (protein) NP_001319934.1 
NP_001329033.1 
NP_193157.1 


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