[←][→] ath   At4g16144 Gene
functional annotation
Function   associated molecule with the SH3 domain of STAM 3      
GO BP
GO:0044090 [list] [network] positive regulation of vacuole organization  (3 genes)  IMP  
GO:0070536 [list] [network] protein K63-linked deubiquitination  (4 genes)  IDA  
GO:0090316 [list] [network] positive regulation of intracellular protein transport  (4 genes)  IMP  
GO:0071108 [list] [network] protein K48-linked deubiquitination  (5 genes)  IDA  
GO:0016926 [list] [network] protein desumoylation  (7 genes)  IDA  
GO:0000338 [list] [network] protein deneddylation  (12 genes)  IDA  
GO:0006897 [list] [network] endocytosis  (33 genes)  IMP  
GO:0007033 [list] [network] vacuole organization  (45 genes)  IMP  
GO:0019941 [list] [network] modification-dependent protein catabolic process  (233 genes)  IDA  
GO:0046907 [list] [network] intracellular transport  (330 genes)  IMP  
GO CC
GO:0005770 [list] [network] late endosome  (43 genes)  IDA  
GO:0016020 [list] [network] membrane  (3629 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0061578 [list] [network] K63-linked deubiquitinase activity  (3 genes)  IEA  
GO:0140492 [list] [network] metal-dependent deubiquitinase activity  (3 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (158 genes)
Protein NP_680708.7 
BLAST NP_680708.7 
Orthologous [Ortholog page] AMSH1 (ath)  LOC4324542 (osa)  LOC4326798 (osa)  LOC7453881 (ppo)  LOC7482259 (ppo)  LOC11414692 (mtr)  LOC11417013 (mtr)  LOC11423551 (mtr)  LOC100777366 (gma)  LOC100800636 (gma)  LOC100804754 (gma)  LOC100806201 (gma)  LOC100806590 (gma)  LOC100812784 (gma)  LOC101258096 (sly)  LOC101266109 (sly)  LOC101290616 (tae)  LOC103832981 (bra)  LOC103860829 (bra)  LOC103871444 (bra)  LOC123061158 (tae)  LOC123069782 (tae)  LOC123087020 (tae)  LOC123090939 (tae)  LOC123095970 (tae)  LOC123443613 (hvu)  LOC123447640 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  nucl_plas 3,  extr 1,  cysk 1  (predict for NP_680708.7)
Subcellular
localization
TargetP
other 9  (predict for NP_680708.7)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with AMSH3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein [detail] 840321
6.3 EXT-like hydroxyproline-rich glycoprotein family protein [detail] 828782
6.3 AtATG18a Transducin/WD40 repeat-like superfamily protein [detail] 825452
Coexpressed
gene list		 [Coexpressed gene list for AMSH3]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 827303      
Refseq ID (protein) NP_680708.7 


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