[←][→] ath   AT4G16310 Gene
functional annotation
Function   LSD1-like 3  
GO BP
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  ISS  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IBA  
KEGG
Protein NP_001319957.1  NP_001328664.1  NP_001328665.1  NP_001328666.1  NP_193364.5 
BLAST NP_001319957.1  NP_001328664.1  NP_001328665.1  NP_001328666.1  NP_193364.5 
Orthologous [Ortholog page] LOC4349214 (osa)  LOC11416384 (mtr)  LOC11426826 (mtr)  LOC100255769 (vvi)  LOC100779479 (gma)  LOC100791869 (gma)  LOC101247522 (sly)  LOC103637393 (zma)  LOC103849514 (bra) 
Subcellular
localization
wolf
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_001319957.1)
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_001328664.1)
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_001328665.1)
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_001328666.1)
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_193364.5)
Subcellular
localization
TargetP
other 9  (predict for NP_001319957.1)
other 9  (predict for NP_001328664.1)
other 9  (predict for NP_001328665.1)
other 9  (predict for NP_001328666.1)
other 9  (predict for NP_193364.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LDL3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.9 AT3G52250 Duplicated homeodomain-like superfamily protein [detail] 824390
10.6 PIE1 SNF2 domain-containing protein / helicase domain-containing protein [detail] 820463
10.0 EFS histone-lysine N-methyltransferase [detail] 844066
9.5 AT2G19390 serine/arginine repetitive matrix protein [detail] 816458
9.3 AT4G38760 nucleoporin (DUF3414) [detail] 830031
8.9 REF4 reduced epidermal fluorescence 4 [detail] 819423
7.8 AT1G73460 Protein kinase superfamily protein [detail] 843681
7.4 AT4G15810 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 827262
6.8 AT4G15020 hAT transposon superfamily [detail] 827161
6.2 AT2G24530 transcriptional regulator of RNA polII, SAGA, subunit [detail] 816989
Coexpressed
gene list		 [Coexpressed gene list for LDL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245491_at
245491_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245491_at
245491_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245491_at
245491_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827325      
Refseq ID (protein) NP_001319957.1 
NP_001328664.1 
NP_001328665.1 
NP_001328666.1 
NP_193364.5 


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