[←][→] ath   At4g16310 Gene
functional annotation
Function   LSD1-like 3      
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001319957.1  NP_001328664.1  NP_001328665.1  NP_001328666.1  NP_193364.5 
BLAST NP_001319957.1  NP_001328664.1  NP_001328665.1  NP_001328666.1  NP_193364.5 
Orthologous [Ortholog page] LOC4349214 (osa)  LOC7479699 (ppo)  LOC7493945 (ppo)  LOC11416384 (mtr)  LOC11426826 (mtr)  LOC100779479 (gma)  LOC100791869 (gma)  LOC101247522 (sly)  LOC103849514 (bra)  LOC123129088 (tae)  LOC123139984 (tae)  LOC123146258 (tae)  LOC123402801 (hvu) 
Subcellular
localization
wolf
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_001319957.1)
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_001328664.1)
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_001328665.1)
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_001328666.1)
nucl 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for NP_193364.5)
Subcellular
localization
TargetP
other 9  (predict for NP_001319957.1)
other 9  (predict for NP_001328664.1)
other 9  (predict for NP_001328665.1)
other 9  (predict for NP_001328666.1)
other 9  (predict for NP_193364.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with LDL3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.7 PIE1 SNF2 domain-containing protein / helicase domain-containing protein [detail] 820463
10.4 HAC12 histone acetyltransferase of the CBP family 12 [detail] 838242
10.0 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein [detail] 840175
9.8 EFS histone-lysine N-methyltransferase [detail] 844066
9.4 AT2G19390 serine/arginine repetitive matrix protein [detail] 816458
9.2 REF4 reduced epidermal fluorescence 4 [detail] 819423
9.1 HUB1 histone mono-ubiquitination 1 [detail] 819104
8.9 AT4G39420 spatacsin carboxy-terminus protein [detail] 830097
8.7 AT4G38760 nucleoporin (DUF3414) [detail] 830031
7.2 SUVR5 histone-lysine N-methyltransferase SUVR5 [detail] 816905
6.9 AT3G57980 DNA-binding bromodomain-containing protein [detail] 824967
6.8 AT4G15020 hAT transposon superfamily [detail] 827161
6.1 AT2G24530 transcriptional regulator of RNA polII, SAGA, subunit [detail] 816989
Coexpressed
gene list		 [Coexpressed gene list for LDL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245491_at
245491_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245491_at
245491_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245491_at
245491_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827325      
Refseq ID (protein) NP_001319957.1 
NP_001328664.1 
NP_001328665.1 
NP_001328666.1 
NP_193364.5 


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