[←][→] ath   AT4G17420 Gene
functional annotation
Function   Tryptophan RNA-binding attenuator protein-like protein  
GO BP
GO:1904292 [list] [network] regulation of ERAD pathway  (4 genes)  IGI  
GO:0030968 [list] [network] endoplasmic reticulum unfolded protein response  (29 genes)  IGI  
GO CC
GO:0000836 [list] [network] Hrd1p ubiquitin ligase complex  (3 genes)  IPI  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001154246.1  NP_001154247.1  NP_567527.1 
BLAST NP_001154246.1  NP_001154247.1  NP_567527.1 
Orthologous [Ortholog page] AT5G47420 (ath)  LOC4334096 (osa)  LOC7471637 (ppo)  LOC11408449 (mtr)  LOC100194302 (zma)  LOC100257929 (vvi)  LOC100799063 (gma)  LOC100809243 (gma)  LOC101263043 (sly)  LOC103853806 (bra)  LOC103868169 (bra)  LOC103868179 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_E.R. 2,  nucl 1  (predict for NP_001154246.1)
chlo 3,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for NP_001154247.1)
nucl 6,  golg 1,  cyto 1,  plas 1,  vacu 1,  cyto_plas 1  (predict for NP_567527.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001154246.1)
other 8  (predict for NP_001154247.1)
other 8  (predict for NP_567527.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 7
ath00510 N-Glycan biosynthesis 2
Genes directly connected with AT4G17420 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 AT5G47420 Tryptophan RNA-binding attenuator protein-like protein [detail] 834789
6.8 UTR3 UDP-galactose transporter 3 [detail] 837998
6.7 SDF2 stromal cell-derived factor 2-like protein precursor [detail] 817049
5.6 AT1G72175 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) [detail] 843549
Coexpressed
gene list		 [Coexpressed gene list for AT4G17420]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245395_at
245395_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245395_at
245395_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245395_at
245395_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827453      
Refseq ID (protein) NP_001154246.1 
NP_001154247.1 
NP_567527.1 


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