[←][→] ath   At4g17890 Gene
functional annotation
Function   ARF-GAP domain 8    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (97 genes)  IEA  
GO:0044087 [list] [network] regulation of cellular component biogenesis  (123 genes)  IEA  
GO:0065003 [list] [network] protein-containing complex assembly  (393 genes)  IEA  
GO:0065008 [list] [network] regulation of biological quality  (480 genes)  IEA  
GO:0048522 [list] [network] positive regulation of cellular process  (856 genes)  IEA  
GO:0019752 [list] [network] carboxylic acid metabolic process  (1307 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath04144 [list] [network] Endocytosis (158 genes)
Protein NP_001031658.1  NP_567543.1 
BLAST NP_001031658.1  NP_567543.1 
Orthologous [Ortholog page] AGD9 (ath)  LOC4334823 (osa)  LOC4349482 (osa)  LOC11418528 (mtr)  LOC11440486 (mtr)  LOC18094163 (ppo)  LOC18096976 (ppo)  LOC100785169 (gma)  LOC100789796 (gma)  LOC101244022 (sly)  LOC101261344 (sly)  LOC103827710 (bra)  LOC103855842 (bra)  LOC103860951 (bra)  LOC123050198 (tae)  LOC123087519 (tae)  LOC123114410 (tae)  LOC123123956 (tae)  LOC123125855 (tae)  LOC123181464 (tae)  LOC123395185 (hvu)  LOC123436162 (hvu) 
Subcellular
localization
wolf
nucl 9,  nucl_plas 5  (predict for NP_001031658.1)
nucl 8,  nucl_plas 5,  chlo 1,  cyto 1,  plas 1  (predict for NP_567543.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001031658.1)
other 8,  chlo 3  (predict for NP_567543.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath04144 Endocytosis 2
Genes directly connected with AGD8 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 NPSN11 Putative plant snare 11 [detail] 818086
7.0 AGD9 ARF-GAP domain 9 [detail] 834718
6.9 PYR6 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 832710
6.3 AUG4 HAUS augmin-like complex subunit [detail] 841493
6.3 AT4G33945 ARM repeat superfamily protein [detail] 829540
4.8 AT3G58800 secretion-regulating guanine nucleotide exchange factor [detail] 825049
Coexpressed
gene list		 [Coexpressed gene list for AGD8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254709_at
254709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254709_at
254709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254709_at
254709_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827512      
Refseq ID (protein) NP_001031658.1 
NP_567543.1 


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