ATTED-II : GeneID search result

[←][→] ath At4g18020 Gene

functional annotation

Function

CheY-like two-component responsive regulator family protein

GO BP

GO:0007623 [list] [network] circadian rhythm

(123 genes)

TAS

GO CC

GO:0005634 [list] [network] nucleus	(10305 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(13880 genes)	ISM

GO MF

GO:0000156 [list] [network] phosphorelay response regulator activity	(33 genes)	ISS
GO:0000976 [list] [network] transcription cis-regulatory region binding	(708 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1576 genes)	ISS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_001078405.1 NP_001154250.1 NP_001190759.1 NP_001329339.1 NP_001329340.1 NP_001329341.1 NP_001329342.1 NP_001329343.1 NP_567548.1 NP_849403.1 NP_849404.2

BLAST

NP_001078405.1 NP_001154250.1 NP_001190759.1 NP_001329339.1 NP_001329340.1 NP_001329341.1 NP_001329342.1 NP_001329343.1 NP_567548.1 NP_849403.1 NP_849404.2

Orthologous

[Ortholog page] LOC11430165 (mtr) LOC18094205 (ppo) LOC18096932 (ppo) LOC25493550 (mtr) LOC100777535 (gma) LOC100779121 (gma) LOC100784905 (gma) LOC100820385 (gma) LOC101245957 (sly) LOC101261945 (sly) LOC103855959 (bra) LOC103860963 (bra)

Subcellular
localization
wolf

nucl 5, cyto 3, nucl_plas 3	(predict for NP_001078405.1)
nucl 5, cyto 3, nucl_plas 3	(predict for NP_001154250.1)
nucl 6, cyto 2, plas 1, vacu 1, pero 1	(predict for NP_001190759.1)
nucl 5, cyto 3, nucl_plas 3	(predict for NP_001329339.1)
nucl 5, cyto 3, nucl_plas 3	(predict for NP_001329340.1)
nucl 6, cyto 2, plas 1, vacu 1, pero 1	(predict for NP_001329341.1)
nucl 5, cyto 3, nucl_plas 3	(predict for NP_001329342.1)
nucl 5, cyto 3, nucl_plas 3	(predict for NP_001329343.1)
nucl 6, cyto 2, plas 1, vacu 1, pero 1	(predict for NP_567548.1)
nucl 6, cyto 2, plas 1, vacu 1, pero 1	(predict for NP_849403.1)
nucl 6, cyto 2, plas 1, vacu 1, pero 1	(predict for NP_849404.2)

Subcellular
localization
TargetP

other 7	(predict for NP_001078405.1)
other 7	(predict for NP_001154250.1)
other 7	(predict for NP_001190759.1)
other 7	(predict for NP_001329339.1)
other 7	(predict for NP_001329340.1)
other 7	(predict for NP_001329341.1)
other 7	(predict for NP_001329342.1)
other 7	(predict for NP_001329343.1)
other 7	(predict for NP_567548.1)
other 7	(predict for NP_849403.1)
other 7	(predict for NP_849404.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00900	Terpenoid backbone biosynthesis	3
ath00860	Porphyrin metabolism	2

Genes directly connected with APRR2 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.2	AT5G14370	CCT motif family protein	[detail]	831288
4.5	AT2G46420	helicase with zinc finger protein	[detail]	819250
4.4	OST1	Protein kinase superfamily protein	[detail]	829541

Coexpressed
gene list

[Coexpressed gene list for APRR2]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254704_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254704_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254704_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	827527
Refseq ID (protein)	NP_001078405.1
	NP_001154250.1
	NP_001190759.1
	NP_001329339.1
	NP_001329340.1
	NP_001329341.1
	NP_001329342.1
	NP_001329343.1
	NP_567548.1
	NP_849403.1
	NP_849404.2

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