[←][→] ath   At4g19440 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0044085 [list] [network] cellular component biogenesis  (1358 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG
Protein NP_001190771.2  NP_001329153.1  NP_001329154.1  NP_567587.2 
BLAST NP_001190771.2  NP_001329153.1  NP_001329154.1  NP_567587.2 
Orthologous [Ortholog page] LOC7491922 (ppo)  LOC11430878 (mtr)  LOC100819570 (gma)  LOC101249228 (sly)  LOC103864169 (bra) 
Subcellular
localization
wolf
chlo 9,  cyto 1  (predict for NP_001190771.2)
chlo 9,  cyto 1  (predict for NP_001329153.1)
chlo 9,  cyto 1  (predict for NP_001329154.1)
chlo 9,  cyto 1  (predict for NP_567587.2)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001190771.2)
chlo 7  (predict for NP_001329153.1)
chlo 7  (predict for NP_001329154.1)
chlo 7  (predict for NP_567587.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT4G19440 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.2 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838903
8.0 AT1G13040 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 837861
7.6 AT4G28010 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 828915
6.2 AT1G05670 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 837074
6.0 PAP28 purple acid phosphatase 28 [detail] 835820
5.4 AT4G22410 U4/U6.U5 tri-snRNP-associated-like protein [detail] 828336
5.0 AT4G19010 AMP-dependent synthetase and ligase family protein [detail] 827639
Coexpressed
gene list		 [Coexpressed gene list for AT4G19440]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254581_at
254581_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254581_at
254581_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254581_at
254581_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827685      
Refseq ID (protein) NP_001190771.2 
NP_001329153.1 
NP_001329154.1 
NP_567587.2 


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