[←][→] ath   At4g19690 Gene
functional annotation
Function   iron-regulated transporter 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0015675 [list] [network] nickel cation transport  (2 genes)  IMP  
GO:0015691 [list] [network] cadmium ion transport  (9 genes)  TAS  
GO:0006828 [list] [network] manganese ion transport  (11 genes)  TAS  
GO:0006829 [list] [network] zinc ion transport  (16 genes)  TAS  
GO:0006879 [list] [network] cellular iron ion homeostasis  (24 genes)  IMP  
GO:0006826 [list] [network] iron ion transport  (27 genes)  TAS  
GO:0030001 [list] [network] metal ion transport  (156 genes)  IMP  
GO:0009617 [list] [network] response to bacterium  (1192 genes)  IEP  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (268 genes)  IDA  
GO:0005768 [list] [network] endosome  (350 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0015086 [list] [network] cadmium ion transmembrane transporter activity  (7 genes)  TAS  
GO:0005385 [list] [network] zinc ion transmembrane transporter activity  (12 genes)  TAS  
GO:0005384 [list] [network] manganese ion transmembrane transporter activity  (14 genes)  TAS  
GO:0005375 [list] [network] copper ion transmembrane transporter activity  (16 genes)  IGI  
GO:0005381 [list] [network] iron ion transmembrane transporter activity  (18 genes)  IGI TAS  
KEGG
Protein NP_567590.3  NP_849546.1 
BLAST NP_567590.3  NP_849546.1 
Orthologous [Ortholog page] LOC543597 (sly)  LOC543598 (sly)  ZIP7 (ath)  IRT2 (ath)  ZIP10 (ath)  LOC4333667 (osa)  LOC4333669 (osa)  LOC7457632 (ppo)  LOC7466942 (ppo)  LOC11409619 (mtr)  LOC11444027 (mtr)  LOC100784872 (gma)  LOC100795511 (gma)  IRT (gma)  LOC101250568 (sly)  LOC103833819 (bra)  LOC103840258 (bra)  LOC103853609 (bra)  LOC103857682 (bra)  LOC103857691 (bra)  LOC103857703 (bra)  LOC103857713 (bra)  LOC103861059 (bra)  LOC103861060 (bra)  LOC103861180 (bra)  LOC123082456 (tae)  LOC123083078 (tae)  LOC123094220 (tae)  LOC123099357 (tae)  LOC123163645 (tae)  LOC123450991 (hvu) 
Subcellular
localization
wolf
plas 6,  extr 1,  golg 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_567590.3)
plas 4,  extr 1,  vacu 1,  golg 1,  chlo 1,  E.R. 1  (predict for NP_849546.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_567590.3)
scret 9  (predict for NP_849546.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis 3
Genes directly connected with IRT1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
18.1 CYP82C4 cytochrome P450, family 82, subfamily C, polypeptide 4 [detail] 829324
12.8 MTPA2 metal tolerance protein A2 [detail] 825050
10.3 FRO2 ferric reduction oxidase 2 [detail] 839411
10.3 AT1G74770 zinc ion binding protein [detail] 843816
8.2 AT3G12900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 820473
7.7 GSTL1 glutathione transferase lambda 1 [detail] 831800
7.5 NAS2 nicotianamine synthase 2 [detail] 835707
7.5 AT3G07720 Galactose oxidase/kelch repeat superfamily protein [detail] 819963
6.3 IREG2 iron regulated 2 [detail] 831787
5.5 AT3G61930 uncharacterized protein [detail] 825366
4.9 MYB10 myb domain protein 10 [detail] 820464
4.5 AT1G73120 F-box/RNI superfamily protein [detail] 843643
Coexpressed
gene list		 [Coexpressed gene list for IRT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254550_at
254550_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254550_at
254550_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254550_at
254550_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827713      
Refseq ID (protein) NP_567590.3 
NP_849546.1 


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