[][] ath   At4g20130 Gene
functional annotation
Function   plastid transcriptionally active 14
GO BP
GO:0042793 [list] [network] plastid transcription  (13 genes)  IMP  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEP  
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (9 genes)  IDA  
GO:0042644 [list] [network] chloroplast nucleoid  (43 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001327969.1  NP_001327970.1  NP_193746.3 
BLAST NP_001327969.1  NP_001327970.1  NP_193746.3 
Orthologous [Ortholog page] LOC4339764 (osa)LOC7465366 (ppo)LOC11437638 (mtr)LOC100786962 (gma)LOC100790985 (gma)LOC101252349 (sly)LOC103834151 (bra)LOC123070075 (tae)LOC123149018 (tae)LOC123183318 (tae)LOC123452251 (hvu)
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for NP_001327969.1)
cyto 8,  nucl 1  (predict for NP_001327970.1)
chlo 9,  nucl 1,  pero 1  (predict for NP_193746.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001327969.1)
other 8  (predict for NP_001327970.1)
chlo 9  (predict for NP_193746.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PTAC14 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.2 AT5G55220 trigger factor type chaperone family protein [detail] 835615
10.9 RAP RAP [detail] 817747
10.6 PDE312 Nucleic acid-binding, OB-fold-like protein [detail] 824009
9.7 AT4G37920 endoribonuclease E-like protein [detail] 829948
8.9 AT2G44640 TRIGALACTOSYLDIACYLGLYCEROL-like protein [detail] 819072
8.5 TIC40 hydroxyproline-rich glycoprotein family protein [detail] 831524
8.4 AT5G38290 Peptidyl-tRNA hydrolase family protein [detail] 833811
8.2 AT3G28460 methyltransferase [detail] 822476
8.0 TOC33 translocon at the outer envelope membrane of chloroplasts 33 [detail] 839248
7.4 emb2737 embryo defective 2737 [detail] 835467
7.0 AT5G16140 Peptidyl-tRNA hydrolase family protein [detail] 831471
6.6 EMB3103 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837634
Coexpressed
gene list
[Coexpressed gene list for PTAC14]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254502_at
254502_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254502_at
254502_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254502_at
254502_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 827759    
Refseq ID (protein) NP_001327969.1 
NP_001327970.1 
NP_193746.3 


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