[][] ath   AT4G20410 Gene
functional annotation
Function   gamma-soluble NSF attachment protein
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (516 genes)  IBA  
GO CC
GO:0031201 [list] [network] SNARE complex  (32 genes)  IBA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO MF
GO:0005483 [list] [network] soluble NSF attachment protein activity  (3 genes)  IBA  
GO:0019905 [list] [network] syntaxin binding  (6 genes)  IBA  
KEGG
Protein NP_001328932.1  NP_567600.1 
BLAST NP_001328932.1  NP_567600.1 
Orthologous [Ortholog page] LOC4337014 (osa)LOC11439927 (mtr)LOC25486665 (mtr)LOC100257968 (vvi)LOC100273308 (zma)LOC100776112 (gma)LOC100790986 (gma)LOC101266478 (sly)LOC103858222 (bra)
Subcellular
localization
wolf
chlo 6,  cyto_nucl 1,  nucl 1,  mito 1,  nucl_plas 1  (predict for NP_001328932.1)
mito 6,  chlo 2,  cyto 1  (predict for NP_567600.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001328932.1)
other 8  (predict for NP_567600.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath04144 Endocytosis 2
Genes directly connected with GSNAP on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.2 SGR4 Vesicle transport v-SNARE family protein [detail] 833947
5.9 ATG3 autophagy 3 (APG3) [detail] 836271
5.5 AT3G55070 LisH/CRA/RING-U-box domains-containing protein [detail] 824673
4.5 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein [detail] 814771
Coexpressed
gene list
[Coexpressed gene list for GSNAP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254476_at
254476_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254476_at
254476_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254476_at
254476_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 827789    
Refseq ID (protein) NP_001328932.1 
NP_567600.1 


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