[←][→] ath   AT4G20840 Gene
functional annotation
Function   FAD-binding Berberine family protein  
GO BP
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IDA IEA  
GO CC
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0016899 [list] [network] oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor  (24 genes)  IDA  
GO:0071949 [list] [network] FAD binding  (68 genes)  IEA  
KEGG
Protein NP_193816.1 
BLAST NP_193816.1 
Orthologous [Ortholog page] AT4G20830 (ath)  AT1G11770 (ath)  AT1G01980 (ath)  LOC7480401 (ppo)  LOC11407647 (mtr)  LOC11420001 (mtr)  LOC25493364 (mtr)  LOC100245607 (vvi)  LOC100246147 (vvi)  LOC100249571 (vvi)  LOC100264985 (vvi)  LOC100775893 (gma)  LOC100776438 (gma)  LOC100781731 (gma)  LOC100788228 (gma)  LOC100788233 (gma)  LOC100796809 (gma)  LOC100797188 (gma)  LOC100797739 (gma)  LOC100813175 (gma)  LOC101264571 (sly)  LOC103834173 (bra)  LOC103850258 (bra)  LOC103858408 (bra)  LOC103861201 (bra)  LOC103861202 (bra)  LOC103871928 (bra)  LOC112421407 (mtr) 
Subcellular
localization
wolf
chlo 4,  vacu 2,  extr 1,  E.R._vacu 1,  nucl 1,  cyto 1,  E.R. 1,  golg 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_193816.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_193816.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00920 Sulfur metabolism 2
Genes directly connected with AT4G20840 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 AT5G55960 transmembrane protein C9orf5 protein [detail] 835694
5.3 AT4G20830 FAD-binding Berberine family protein [detail] 827831
4.9 AT4G20820 FAD-binding Berberine family protein [detail] 827830
4.9 AT5G44410 FAD-binding Berberine family protein [detail] 834467
Coexpressed
gene list		 [Coexpressed gene list for AT4G20840]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254431_at
254431_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254431_at
254431_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254431_at
254431_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827832      
Refseq ID (protein) NP_193816.1 


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