[←][→] ath   AT4G21710 Gene
functional annotation
Function   DNA-directed RNA polymerase family protein  
GO BP
GO:0035196 [list] [network] production of miRNAs involved in gene silencing by miRNA  (29 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  NAS  
GO CC
GO:0005665 [list] [network] RNA polymerase II, core complex  (22 genes)  IBA IDA IPI ISS  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0001055 [list] [network] RNA polymerase II activity  (19 genes)  IBA  
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IBA ISS  
GO:0032549 [list] [network] ribonucleoside binding  (251 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_193902.1 
BLAST NP_193902.1 
Orthologous [Ortholog page] rpb2 (sly)  LOC4333571 (osa)  LOC11428063 (mtr)  LOC100252267 (vvi)  LOC100277195 (zma)  RPB2-2 (sly)  LOC100790162 (gma)  LOC100810288 (gma)  LOC103626041 (zma)  LOC103834217 (bra)  LOC103859322 (bra)  LOC103861245 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 2,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_193902.1)
Subcellular
localization
TargetP
other 9  (predict for NP_193902.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with NRPB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 CHR11 chromatin-remodeling protein 11 [detail] 819814
8.6 GTA2 global transcription factor group A2 [detail] 826391
8.4 LIS WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein [detail] 818748
8.3 HMG high mobility group [detail] 822505
Coexpressed
gene list		 [Coexpressed gene list for NRPB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254368_at
254368_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254368_at
254368_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254368_at
254368_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828259      
Refseq ID (protein) NP_193902.1 


The preparation time of this page was 3.2 [sec].