ATTED-II : GeneID search result

[←][→] ath At4g21880 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO:0009790 [list] [network] embryo development	(780 genes)	IEA
GO:0010154 [list] [network] fruit development	(1349 genes)	IEA

GO CC

GO MF

KEGG

Protein

NP_001329309.1 NP_193919.6

BLAST

NP_001329309.1 NP_193919.6

Orthologous

[Ortholog page] AT4G04790 (ath) LOC4328206 (osa) LOC7454408 (ppo) LOC11446150 (mtr) LOC18095898 (ppo) LOC100787964 (gma) LOC100790259 (gma) LOC101258770 (sly) LOC103839815 (bra) LOC103859553 (bra) LOC106794216 (gma) LOC123132071 (tae) LOC123136097 (tae) LOC123143600 (tae) LOC123401633 (hvu)

Subcellular
localization
wolf

nucl 6, cyto 2, chlo 1, cysk 1	(predict for NP_001329309.1)
chlo 5, chlo_mito 4, nucl 2, mito 1	(predict for NP_193919.6)

Subcellular
localization
TargetP

other 9	(predict for NP_001329309.1)
scret 5, mito 3	(predict for NP_193919.6)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G21880 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.5	AT4G04790	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	825816
7.5	AT5G66960	Prolyl oligopeptidase family protein	[detail]	836830
7.2	FAC19	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	837941

Coexpressed
gene list

[Coexpressed gene list for AT4G21880]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254381_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254381_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254381_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828277
Refseq ID (protein)	NP_001329309.1
Refseq ID (protein)	NP_193919.6

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