| functional annotation |
| Function |
Ubiquitin C-terminal hydrolases superfamily protein |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0000245 [list] [network] spliceosomal complex assembly
|
(7 genes)
|
IEA
|
 |
|
GO:0016579 [list] [network] protein deubiquitination
|
(39 genes)
|
IEA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0004843 [list] [network] cysteine-type deubiquitinase activity
|
(38 genes)
|
IEA
|
|
|
GO:0008270 [list] [network] zinc ion binding
|
(429 genes)
|
IEA
|
|
|
| KEGG |
ath03040 [list] [network] Spliceosome (203 genes) |
 |
| Protein |
NP_001190799.1
NP_001328531.1
NP_001328532.1
NP_193966.2
|
| BLAST |
NP_001190799.1
NP_001328531.1
NP_001328532.1
NP_193966.2
|
| Orthologous |
[Ortholog page]
AT4G22410 (ath)
LOC4347019 (osa)
AT4G22285 (ath)
LOC7455836 (ppo)
LOC7463667 (ppo)
LOC11437744 (mtr)
LOC25492882 (mtr)
LOC100792529 (gma)
LOC100792642 (gma)
LOC101263781 (sly)
LOC103859993 (bra)
LOC103861306 (bra)
LOC117126225 (bra)
LOC123088443 (tae)
LOC123150293 (tae)
LOC123167533 (tae)
LOC123426749 (hvu)
|
Subcellular
localization
wolf |
|
nucl 7,
chlo 1,
cyto 1,
vacu 1,
pero 1,
cyto_pero 1
|
(predict for NP_001190799.1)
|
|
nucl 9,
cyto 1,
vacu 1
|
(predict for NP_001328531.1)
|
|
nucl 9,
cyto 1,
vacu 1
|
(predict for NP_001328532.1)
|
|
nucl 6,
cyto 1,
chlo 1,
vacu 1,
pero 1,
cyto_E.R. 1,
cyto_plas 1
|
(predict for NP_193966.2)
|
|
Subcellular
localization
TargetP |
|
other 7,
chlo 3
|
(predict for NP_001190799.1)
|
|
other 7,
chlo 3
|
(predict for NP_001328531.1)
|
|
other 7,
chlo 3
|
(predict for NP_001328532.1)
|
|
other 9
|
(predict for NP_193966.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03040 |
Spliceosome |
4 |
 |
Genes directly connected with AT4G22350 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 6.6 |
AT5G37130 |
Protein prenylyltransferase superfamily protein |
[detail] |
833685 |
| 6.4 |
AT4G22285 |
Ubiquitin C-terminal hydrolases superfamily protein |
[detail] |
5008155 |
| 6.0 |
AT5G37340 |
ZPR1 zinc-finger domain protein |
[detail] |
833708 |
| 4.4 |
AT5G43210 |
Excinuclease ABC, C subunit, N-terminal |
[detail] |
834339 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT4G22350]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
At4g22350 Gene
