[][] ath   AT4G23500 Gene
functional annotation
Function   Pectin lyase-like superfamily protein
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG
Protein NP_194081.1 
BLAST NP_194081.1 
Orthologous [Ortholog page] AT2G23900 (ath)AT3G48950 (ath)AT3G61490 (ath)LOC4331458 (osa)LOC4339868 (osa)LOC7472748 (ppo)LOC7494526 (ppo)LOC7497216 (ppo)LOC11408934 (mtr)LOC11414847 (mtr)LOC11420475 (mtr)LOC11421560 (mtr)LOC11422557 (mtr)LOC25500842 (mtr)LOC25502095 (mtr)LOC100250814 (vvi)LOC100255362 (vvi)LOC100255958 (vvi)LOC100262858 (vvi)LOC100284735 (zma)LOC100284797 (zma)LOC100776827 (gma)LOC100778404 (gma)LOC100779166 (gma)LOC100785005 (gma)LOC100785841 (gma)LOC100787980 (gma)LOC100794916 (gma)LOC100795453 (gma)LOC100803375 (gma)LOC100812836 (gma)LOC100816232 (gma)LOC100818998 (gma)LOC100852885 (vvi)LOC101247546 (sly)LOC101255793 (sly)LOC101258597 (sly)LOC101265204 (sly)LOC101265512 (sly)LOC103841972 (bra)LOC103861130 (bra)LOC103861401 (bra)LOC103864502 (bra)LOC103873101 (bra)
Subcellular
localization
wolf
chlo 5,  vacu 2,  nucl 1,  E.R._vacu 1  (predict for NP_194081.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_194081.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G23500 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.8 AT5G09760 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 830836
6.2 AT1G02460 Pectin lyase-like superfamily protein [detail] 839443
5.9 AT3G61490 Pectin lyase-like superfamily protein [detail] 825322
3.2 AT4G06534 transmembrane protein [detail] 826005
Coexpressed
gene list
[Coexpressed gene list for AT4G23500]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 828450    
Refseq ID (protein) NP_194081.1 


The preparation time of this page was 0.1 [sec].