[][] ath   At4g24210 Gene
functional annotation
Function   F-box family protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0009939 [list] [network] positive regulation of gibberellic acid mediated signaling pathway  (9 genes)  IMP  
GO:0009938 [list] [network] negative regulation of gibberellic acid mediated signaling pathway  (15 genes)  IGI  
GO:0010162 [list] [network] seed dormancy process  (49 genes)  IMP  
GO:0009845 [list] [network] seed germination  (99 genes)  IGI IMP  
GO:0009739 [list] [network] response to gibberellin  (116 genes)  IGI  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (41 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04075 [list] [network] Plant hormone signal transduction (291 genes)
Protein NP_194152.1 
BLAST NP_194152.1 
Orthologous [Ortholog page] LOC7462857 (ppo)LOC18104831 (ppo)LOC25489913 (mtr)LOC100037602 (tae)LOC100527591 (gma)LOC100794333 (gma)LOC100801734 (gma)LOC100802513 (gma)GID2 (sly)LOC103861839 (bra)LOC112937812 (osa)LOC123060026 (tae)LOC123068510 (tae)LOC123068514 (tae)LOC123077004 (tae)LOC123170999 (tae)LOC123181142 (tae)LOC123442616 (hvu)LOC123442620 (hvu)
Subcellular
localization
wolf
nucl 6,  cyto 1,  mito 1,  extr 1,  cysk 1,  chlo_mito 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_194152.1)
Subcellular
localization
TargetP
other 9  (predict for NP_194152.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SLY1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.0 AT3G06590 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 819838
4.7 PH1 pleckstrin homologue 1 [detail] 817520
4.7 MEE60 maternal effect embryo arrest 60 [detail] 830480
Coexpressed
gene list
[Coexpressed gene list for SLY1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254160_at
254160_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254160_at
254160_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254160_at
254160_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 828522    
Refseq ID (protein) NP_194152.1 


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